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A chicken embryo gene expression database

	Anatomical Location
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	Gene Name
	GEISHA ID
	Multiple Parameters

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GALNT1
polypeptide N-acetylgalactosaminyltransferase 1

Gene

Official Symbol	GALNT1
Official Full Name	polypeptide N-acetylgalactosaminyltransferase 1
CGNC ID	51380
also known as	polypeptide N-acetylgalactosaminyltransferase 1\|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC

Sequence Information

Genomic
RNA	NM_001006381
Polypeptide	NP_001006381

Gene Expression

In Situ Hybridization

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly	326151			FBgn0031681
Human	2589	ENSG00000141429		MIM:602273
Mouse	14423	ENSMUSG00000000420	All phenotypic alleles (6):Targeted, knock-out(2) Targeted, other(3) Gene trapped(1)	MGI:894693
Xenopus	594943, 398911			1013397
Zebrafish	559073	ENSDARG00000061335	ZDB-GENE-030131-2360	ZFIN:ZDB-GENE-030131-2360

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	420955
Ensembl Gene	ENSGALG00000013135
KEGG	gga:420955

GEISHA Id	GALNT1.Roy.2013	Data Source	Publication
Complete cDNA Template Probe	show CCCTTGGTCTCCCGCCGGCCCGAGCGTCACCGAGCCTTAAGACCTTTTGGATGGAAGACCTGTGGTTCTGTGTTCATGT CAGAATGACCTAGATCACTTTGCCACTCCATGGTTCCTACCGCAAGCGCTTGACTGCAGTGCAGTGGGATTTCACCACC AGTGCTTGTGGACCATCCAGATGGCTGTAAACCTGCAGAGGAGATACAGAACGTGGTCTCTCAAACTGGATTAAAACAA CCTGTTGATATTTTTATTTATACTTTTTTTTATTTTTGTATTTGACTTAAAGTGCCATGAAAAAATTTGCATATTGCAA GGTGGTCCTTGCCACCTCTTTGGTTTGGGTCCTTCTGGATATGTTTCTACTGCTCTACTTCAGTGAATGCAACAAATGT GATGAGAAGAAAGAACGAGGGCTGCCTGCTGGAGATGTTCCAGAACCCATACAAAAACCACATGAAGGACCTGGAGAGA TGGGGAAGCCTGTGGTCATTCCAAAAGAGGAGCAAGAAAAAATGAAAGAAATGTTTAAAATAAACCAGTTTAACTTAAT GGCAAGTGAAATGATTGCACTCAACAGATCTTTACCTGATGTCCGGTTAGAAGGTTGTAAAACAAAGGTGTATGCAGAC AACCTTCCCACAACAAGCGTTGTCATTGTTTTTCACAATGAGGCTTGGAGCACACTTCTACGAACTGTTCATAGTGTGA TAAACCGGTCACCACGACACATGCTGGAAGAAATTGTACTTGTTGATGATGCCAGTGAAAGAGACTTTCTGAAAAGACC ACTGGAGAGCTATGTAAAAAAATTAAAAGTACCTGTCCATGTGATTCGAATGGAACAGCGCTCTGGTTTGATCAGAGCT AGATTAAAGGGGGCTGCCGCTTCCAAAGGCCAGGTCATCACCTTCTTAGATGCTCATTGTGAATGTACAGTAGGCTGGC TTGAACCTCTGCTGGCAAGGATCAAAGCTGACAGGAGAACAGTCGTGTGTCCCATCATTGATGTTATTAGTGATGACAC CTTTGAATACATGGCAGGTTCTGATATGACCTATGGTGGTTTCAACTGGAAGTTGAATTTTCGTTGGTATCCGGTTCCT CAGAGAGAGATGGATCGACGGAAAGGAGATCGAACTCTTCCTGTTAGGACGCCTACAATGGCAGGAGGTCTTTTTTCAA TAGACAGAGATTACTTTCAGGAAATTGGAACGTATGATGCTGGAATGGATATTTGGGGTGGAGAAAACTTAGAAATTTC TTTCAGGATTTGGCAGTGTGGTGGCACTTTGGAAATTGTAACTTGTTCACATGTCGGGCATGTGTTCAGAAAAGCAACA CCATATACTTTTCCAGGAGGTACAGGGCAGATAATCAACAAAAATAACAGACGGCTTGCAGAAGTCTGGATGGATGAAT TCAAAAACTTTTTTTATATCATTTCCCCAGGAGTAACTAAAGTTGACTATGGGGACATATCATCACGACTTGGATTGAG ACGCAAGCTTCAGTGTAAGCCTTTCTCCTGGTACCTGGAGAATGTTTATCCTGATTCCCAAATTCCACGCCATTATTTT TCTTTGGGGGAGATAAGAAACGTGGAAACAAATCAATGTCTGGATAACATGGCAAGAAAAGAAAATGAAAAAGTTGGGA TCTTTAACTGCCACGGAATGGGTGGAAATCAGGTTTTCTCATATACAGCCAACAAAGAAATTCGAACAGATGATTTGTG TTTAGATGTCTCCAAACTTAATGGCCCGGTAACAATGCTCAAGTGCCACCATCTAAAAGGAAATCAGCTTTGGGAATAT GATCCAGTGAAATTAACCCTGCTGCATGTGAACAGTAATCAGTGCCTGGACAAAGCCACCGAAGAAGACAGCCAGGTAC CCAGCATCAGAGACTGCAACGGCAGCCGCTCTCAGCAGTGGCTACTTCGCAACGTCACCCTTCCAGAAATATTCTGAGA GGTTCTAAAGAAAATAAAGGATTGACTGGGCTACCTCGGCTAATATTTTGGCTACACTGTTAAGTAGCAACAGAAGGAA ACTTCTCTGCAGAATCCACAGTTTGCCACCTGTTAGAACTCCTGCAGCTTTTCTGTAGCTGTGAACCAGCCTTCCTGTA AAAGGATGTGAAACTACCACATATACTAGTGAGACTGCGCCCACTGATGTTTACAAGATTGAAAGAGTTTCTTCCAGCA AATCACGTAGAGAACATTTGGACAGTGGAAACATAATCAATGAAATATTCTTTCTGAGGAGCTGCATATCGTCGTAGTT TGCTTGCACATCAGTAACCTCTGCTGAAAGTGCTGTTGTAAGGAAGAAAGTTCCAAGACTTTTTTTTTTTCCTGGTTAG AAGTGGTAACCAGACTACTAAATACAGATCTACAAATAAGCAGAGAGCTGGGAAATGGATTCAATAACATGAAATAAGA ATTCTGTGGTTTAAGGAAAAAAAAAAAAAGTAAACAGGGTTGAATGGAAACTAAATCAGAACTATGAAAAGTACAATTT GTTATAGTGAAGTATCAAATTTATATGTAGATTTTATACCTCAGTGGGGGATGATAACCAAGTCAAAACGCAATTCTCT TTTTTTTTCAATTGTGTGATAGTCCATAAATACTTCTTTTTTCCCTGGTGGGTCTCAAATAATTTTGGGCGCAAAGAAA ATGAGCGTAAGAATAAACTTAGCTCTTGAATGTCAGATCAACATTTCTATTTTAATTTCTTGGCTGTTGGAATTGTATC TTTTTATTACTGTCTGAAAACTGGAGGTTAACATGCTGTCTAACTTTTTTTTTTTTGTCCAGACCTGACATTTCAGTTT GTATTTGGGTCAGTCAGCTTTCATGGACTTTCATGGCCAAACAGAAGATTTAAGTACGTTTTGAAATCCGTAAGTTAAC TTGATGGAATACACCTAGCACCCAGAACTCATACTACTGTACTATGGTTTTGTTTTCATAGCCATAAATCTTTTGTTCC CTGTTTGATTTCGGTCATCGGAAAGCCAGAAGAGAAGATGCATGGTGTGGGTAGCAGGAGATTGGCAAAACTGAAGGTT TTCTGGAATCCTTTTTCACTCCATATTCAGATGTGCTTCATTGTCAAGTGCATATTTAGATTAGATTCTGAATTGTAAT GTTGATCTGCTGCTTTTTTCTAATAAAACCTAAAGAAAGGTAGCTAAATTGGTATGGTTTTAAGTTAACATAGCCAAAA GCAATATGACTGTGTCATTACATGGGTCTGCATTTTTTTTTTTTAACTGAATTGTTTTGTTCTGTTAAGAAAAATCTGT GTGGGCGGATGATGAAAATGAGCTACTGAATGCTCAGGCTATATGTTGAATTTTCTTTTGGAAAGAAAAATGAGATTTA CTTAATGGAGAGGATATTTTTATGATAAATGTCATTGTTTGGCCAACTGTCCTGTAAAGCGAATTAAATCTAGTCTCCT GCAAAAAAAAAAAAAAA
Citation	Roy P, Kumar B, Shende A, Singh A, Meena A, Ghosal R, Ranganathan M, Bandyopadhyay A. A Genome-Wide Screen Indicates Correlation between Differentiation and Expression of Metabolism Related Genes. PLoS One. 2013 May 22;8(5):e63670
Copyright	This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_001006381.1

Stage

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Location (click to highlight)

Comments (click to highlight)

19-22

stage 22

stage 22

Mouse

Emage
MGI GXD	MGI:894693

Frog

Xenbase

Fruit Fly

BDGP	FBgn0031681

Zebra Finch

ZEBrA

Zebrafish

ZFIN	ZDB-GENE-030131-2360

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