GEISHA - A Chicken Embryo Gene Expression Database
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GALNT1
polypeptide N-acetylgalactosaminyltransferase 1

Gene
Official SymbolGALNT1
Official Full Namepolypeptide N-acetylgalactosaminyltransferase 1
CGNC ID51380
also known aspolypeptide N-acetylgalactosaminyltransferase 1|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001006381
PolypeptideNP_001006381
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.21315
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly326151FBgn0031681
Human2589ENSG00000141429MIM:602273
Mouse14423ENSMUSG00000000420All phenotypic alleles (6):Targeted, knock-out(2) Targeted, other(3) Gene trapped(1) MGI:894693
Xenopus594943, 3989111013397
Zebrafish559073ENSDARG00000061335ZDB-GENE-030131-2360ZFIN:ZDB-GENE-030131-2360
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene420955
Ensembl GeneENSGALG00000013135
KEGGgga:420955
GEISHA IdGALNT1.Roy.2013Data SourcePublication
Complete cDNA Template Probeshow
CCCTTGGTCTCCCGCCGGCCCGAGCGTCACCGAGCCTTAAGACCTTTTGGATGGAAGACCTGTGGTTCTGTGTTCATGT
CAGAATGACCTAGATCACTTTGCCACTCCATGGTTCCTACCGCAAGCGCTTGACTGCAGTGCAGTGGGATTTCACCACC
AGTGCTTGTGGACCATCCAGATGGCTGTAAACCTGCAGAGGAGATACAGAACGTGGTCTCTCAAACTGGATTAAAACAA
CCTGTTGATATTTTTATTTATACTTTTTTTTATTTTTGTATTTGACTTAAAGTGCCATGAAAAAATTTGCATATTGCAA
GGTGGTCCTTGCCACCTCTTTGGTTTGGGTCCTTCTGGATATGTTTCTACTGCTCTACTTCAGTGAATGCAACAAATGT
GATGAGAAGAAAGAACGAGGGCTGCCTGCTGGAGATGTTCCAGAACCCATACAAAAACCACATGAAGGACCTGGAGAGA
TGGGGAAGCCTGTGGTCATTCCAAAAGAGGAGCAAGAAAAAATGAAAGAAATGTTTAAAATAAACCAGTTTAACTTAAT
GGCAAGTGAAATGATTGCACTCAACAGATCTTTACCTGATGTCCGGTTAGAAGGTTGTAAAACAAAGGTGTATGCAGAC
AACCTTCCCACAACAAGCGTTGTCATTGTTTTTCACAATGAGGCTTGGAGCACACTTCTACGAACTGTTCATAGTGTGA
TAAACCGGTCACCACGACACATGCTGGAAGAAATTGTACTTGTTGATGATGCCAGTGAAAGAGACTTTCTGAAAAGACC
ACTGGAGAGCTATGTAAAAAAATTAAAAGTACCTGTCCATGTGATTCGAATGGAACAGCGCTCTGGTTTGATCAGAGCT
AGATTAAAGGGGGCTGCCGCTTCCAAAGGCCAGGTCATCACCTTCTTAGATGCTCATTGTGAATGTACAGTAGGCTGGC
TTGAACCTCTGCTGGCAAGGATCAAAGCTGACAGGAGAACAGTCGTGTGTCCCATCATTGATGTTATTAGTGATGACAC
CTTTGAATACATGGCAGGTTCTGATATGACCTATGGTGGTTTCAACTGGAAGTTGAATTTTCGTTGGTATCCGGTTCCT
CAGAGAGAGATGGATCGACGGAAAGGAGATCGAACTCTTCCTGTTAGGACGCCTACAATGGCAGGAGGTCTTTTTTCAA
TAGACAGAGATTACTTTCAGGAAATTGGAACGTATGATGCTGGAATGGATATTTGGGGTGGAGAAAACTTAGAAATTTC
TTTCAGGATTTGGCAGTGTGGTGGCACTTTGGAAATTGTAACTTGTTCACATGTCGGGCATGTGTTCAGAAAAGCAACA
CCATATACTTTTCCAGGAGGTACAGGGCAGATAATCAACAAAAATAACAGACGGCTTGCAGAAGTCTGGATGGATGAAT
TCAAAAACTTTTTTTATATCATTTCCCCAGGAGTAACTAAAGTTGACTATGGGGACATATCATCACGACTTGGATTGAG
ACGCAAGCTTCAGTGTAAGCCTTTCTCCTGGTACCTGGAGAATGTTTATCCTGATTCCCAAATTCCACGCCATTATTTT
TCTTTGGGGGAGATAAGAAACGTGGAAACAAATCAATGTCTGGATAACATGGCAAGAAAAGAAAATGAAAAAGTTGGGA
TCTTTAACTGCCACGGAATGGGTGGAAATCAGGTTTTCTCATATACAGCCAACAAAGAAATTCGAACAGATGATTTGTG
TTTAGATGTCTCCAAACTTAATGGCCCGGTAACAATGCTCAAGTGCCACCATCTAAAAGGAAATCAGCTTTGGGAATAT
GATCCAGTGAAATTAACCCTGCTGCATGTGAACAGTAATCAGTGCCTGGACAAAGCCACCGAAGAAGACAGCCAGGTAC
CCAGCATCAGAGACTGCAACGGCAGCCGCTCTCAGCAGTGGCTACTTCGCAACGTCACCCTTCCAGAAATATTCTGAGA
GGTTCTAAAGAAAATAAAGGATTGACTGGGCTACCTCGGCTAATATTTTGGCTACACTGTTAAGTAGCAACAGAAGGAA
ACTTCTCTGCAGAATCCACAGTTTGCCACCTGTTAGAACTCCTGCAGCTTTTCTGTAGCTGTGAACCAGCCTTCCTGTA
AAAGGATGTGAAACTACCACATATACTAGTGAGACTGCGCCCACTGATGTTTACAAGATTGAAAGAGTTTCTTCCAGCA
AATCACGTAGAGAACATTTGGACAGTGGAAACATAATCAATGAAATATTCTTTCTGAGGAGCTGCATATCGTCGTAGTT
TGCTTGCACATCAGTAACCTCTGCTGAAAGTGCTGTTGTAAGGAAGAAAGTTCCAAGACTTTTTTTTTTTCCTGGTTAG
AAGTGGTAACCAGACTACTAAATACAGATCTACAAATAAGCAGAGAGCTGGGAAATGGATTCAATAACATGAAATAAGA
ATTCTGTGGTTTAAGGAAAAAAAAAAAAAGTAAACAGGGTTGAATGGAAACTAAATCAGAACTATGAAAAGTACAATTT
GTTATAGTGAAGTATCAAATTTATATGTAGATTTTATACCTCAGTGGGGGATGATAACCAAGTCAAAACGCAATTCTCT
TTTTTTTTCAATTGTGTGATAGTCCATAAATACTTCTTTTTTCCCTGGTGGGTCTCAAATAATTTTGGGCGCAAAGAAA
ATGAGCGTAAGAATAAACTTAGCTCTTGAATGTCAGATCAACATTTCTATTTTAATTTCTTGGCTGTTGGAATTGTATC
TTTTTATTACTGTCTGAAAACTGGAGGTTAACATGCTGTCTAACTTTTTTTTTTTTGTCCAGACCTGACATTTCAGTTT
GTATTTGGGTCAGTCAGCTTTCATGGACTTTCATGGCCAAACAGAAGATTTAAGTACGTTTTGAAATCCGTAAGTTAAC
TTGATGGAATACACCTAGCACCCAGAACTCATACTACTGTACTATGGTTTTGTTTTCATAGCCATAAATCTTTTGTTCC
CTGTTTGATTTCGGTCATCGGAAAGCCAGAAGAGAAGATGCATGGTGTGGGTAGCAGGAGATTGGCAAAACTGAAGGTT
TTCTGGAATCCTTTTTCACTCCATATTCAGATGTGCTTCATTGTCAAGTGCATATTTAGATTAGATTCTGAATTGTAAT
GTTGATCTGCTGCTTTTTTCTAATAAAACCTAAAGAAAGGTAGCTAAATTGGTATGGTTTTAAGTTAACATAGCCAAAA
GCAATATGACTGTGTCATTACATGGGTCTGCATTTTTTTTTTTTAACTGAATTGTTTTGTTCTGTTAAGAAAAATCTGT
GTGGGCGGATGATGAAAATGAGCTACTGAATGCTCAGGCTATATGTTGAATTTTCTTTTGGAAAGAAAAATGAGATTTA
CTTAATGGAGAGGATATTTTTATGATAAATGTCATTGTTTGGCCAACTGTCCTGTAAAGCGAATTAAATCTAGTCTCCT
GCAAAAAAAAAAAAAAA
CitationRoy P, Kumar B, Shende A, Singh A, Meena A, Ghosal R, Ranganathan M, Bandyopadhyay A. A Genome-Wide Screen Indicates Correlation between Differentiation and Expression of Metabolism Related Genes. PLoS One. 2013 May 22;8(5):e63670
CopyrightThis is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_001006381.1
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-22
stage 22
stage 22
Eye
Lens
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.21315

Mouse

Emage
EurexpressMGI:894693
MGI GXDMGI:894693

Frog

Xenbase1013397

Fruit Fly

BDGPFBgn0031681

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030131-2360
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