GEISHA - A Chicken Embryo Gene Expression Database
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CFAP36
cilia and flagella associated protein 36

Gene
Official SymbolCFAP36
Official Full Namecilia and flagella associated protein 36
CGNC ID6105
also known asCCDC104, cilia- and flagella-associated protein 36|coiled-coil domain containing 104|coiled-coil domain-containing protein 104
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001199423
PolypeptideNP_001186352
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.40339
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly41676FBgn0038170
Human112942ENSG00000163001
Mouse216618ENSMUSG00000020462All phenotypic alleles (4):Targeted, other(4) MGI:1913994
Xenopus394695, 380533988919
Zebrafish678564ENSDARG00000037079ZDB-GENE-060421-8162ZFIN:ZDB-GENE-060421-8162
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene421209
Ensembl Gene
KEGGgga:421209
GEISHA IdCCDC104.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template Primer5'-AAAGGAGAAGGACGGAAGAGGCAC-3'
Reverse cDNA Template Primer5'-AATTAACCCTCACTAAAGGACATACAAGACGGTCACAGTAGC-3'cDNA Template Length1014
Complete cDNA Template Probeshow
AAAGGAGAAGGACGGAAGAGGCACGTGCTAAATGCAAATCACCAGCTGTGACCAGTTTTCCAGGAGATTCAAGAGAAAC
TGTAAAAGTTAAGGAGTCTACTGAGGGAGCTGATCGTTCTGAAGAAACTCCAAAATTATCATTAGAGGAATCTCGGAAA
CCTGCAAAGGCAGACTTAAAACCAGTCCGCCCATTGCAGAAAGACCCAGAGAGCTTAGCTCAGCCCACCAGAGGGAAGG
AGGACACAAAGAAAAGACCACCTGGAAAACGTGCAGAAAGTGCAGCGCAGAAAGCTGCGACAGAAGGACACAATACACC
AGAACTTGATGAGCAGCAGCTGAAACAACGGGAAGACTACCTTAAGAAAAAACGAGATATGCTGATAGCTGCAAAGAAA
GAGTCCAGAAACAATATAATACCACCCACAAACACAGACCAGAAGGAGGAGGAACCATCTCCTAAAGAGGAAGTTTCAG
AAGAGAAGCAAAAATTACTGCAGAAGAGGAAAGTGCTGGCAGAAAAACTAAAAGAAGAAGTTATTAATAAGCGGTAATT
GAGAGAATTTCATTGCAGATCTCTCAAGAGCAGAGGCATCTTTTAGAATAAATTACATAACCAATAATGGAACGGGTTT
GTTTTCAAGTATCTTACACTCGTTTTTATAGAACTTTCAGACAACTCATTCTGTACTTTGTATAAAATATTTGAAGTTA
CGCTGAAATACATTGAGGACAGATTTTCCAAAATGCTGGAAACTCACTGATTTTCACTGGAATGTGCTCAACAGTGAGG
CAGTTTCACAGCCTCAGCCACTCAAAAATAGAGTAAAAGCAAATACTTATCTGTTAAAATAATAACTAAAAATGTGAAC
GAACAGATTTGAATAACTTAAAACTTTAACTTTTTCTAAAGATTATAGAATTTGGCTCATTAGAATATCAGAAATAAAC
TACTGTTTTGGGGCCGTAATGGAGTCTGAGTTCACATGGAAGTGCTACTGTGACCGTCTTGTATGT
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
Early Mesoderm
Extraembryonic Mesoderm
Primitive Streak
 
7-12
stage 7
stage 9
stage 11
Anterior Intestinal Portal
Blood Islands
Forebrain
Head Mesenchyme
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Notochord
Sinus Venosus
Somites
extraembryonic ectoderm
extraembryonic endoderm
extraembryonic mesoderm
 
13-18
stage 18
Ubiquitous Embryonic
 
19-24
stage 19
stage 21
stage 21
Foregut
Head Mesenchyme
Leg Mesenchyme
Liver
Lung
Neural Plate/Tube
Pharyngeal Arches and Clefts
Proepicardium
Sclerotome
Spinal Ganglia and Nerves
Ubiquitous Embryonic
Wing Mesenchyme
 
25-26
stage 26
Widespread Expression
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.40339

Mouse

EmageMGI:1913994
EurexpressMGI:1913994
MGI GXDMGI:1913994

Frog

Xenbase988919

Fruit Fly

BDGPFBgn0038170

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-060421-8162
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