GEISHA - A Chicken Embryo Gene Expression Database
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XPO5
exportin 5

Gene
Official SymbolXPO5
Official Full Nameexportin 5
CGNC ID7870
also known asexportin-5, exportin 5
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001277652
PolypeptideNP_001264581
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.53411
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly32970FBgn0031051
Human57510ENSG00000124571MIM:607845
Mouse72322ENSMUSG00000067150All phenotypic alleles (2):Targeted, other(2) MGI:1913789
Xenopus3947175947327
Zebrafish558662ENSDARG00000078338
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene421450
Ensembl GeneENSGALG00000010341
KEGGgga:421450

Entry 1

GEISHA IdI47Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GGAACCACAACACAGCTTTGCTGGCCGCTGCTCAAACAGGTGCTTCCAGGCAATTTGCTGCCCGACGCCGTGTCCTGGT
TTTTCACCAGTGTGCTGAAGGGCTTACAGATCCACGGGCAGCACGATGGCTGCATGGCAGCTCTCGTCCATCTGGCTTT
CCAGATCTACGAGGCCTTGCGTCCTCGCTATGCTGAGCTGAAGGTGGTGATGGAGCAGATCCCAGACATCCAGAGGGAC
TCATTGGAGCAGTTTGATTCAAAGCTTCTTAACCCAACGCTGCAGAAAGTGGCAGACAAGCGCCGGAAAGATCATTTCA
AACGCCTCATAACGGGTTGCATTGGGAAGCCACTTGGGGAGCAGTTCCGCAAGGAGGTTCATATCCGGAACCTCCCATC
TCTCTTCAAAAAGGTGAAGCCGTCACTGGAGACAGATGTGCTGGAGACAAATGAGGATGGAGAGGATCTCAC
Commentsubiquitous or nearly ubiquitous, not extraembryonic from st 4-21
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 13
stage 14
Ubiquitous Embryonic
Unlabeled Extraembryonic
Widespread Expression
 
19-21
stage 21
Ubiquitous Embryonic
Unlabeled Extraembryonic
not extraembryonic

Entry 2

GEISHA IdXPO5.Carraco.2014Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
TCTTGCTGCCCAGCTCATCAACTCAGCTTTCATCAACCTCAACAACATTCCCGATTACAGATTGCGACCTATGCTCCGT
GTGTTTGTGAAGCCCATGGTACTCTCTTGCCCTCCAGAATACTACGAAACCCTTGTCTGCCCCATGCTGGGACCACTCT
TTACCTATCTGCACATGAGGTTGTCTCAGAAATGGGAAGTGATCAACCAGCGAAGCATTCTCTGTGAGGATGATGCTGC
AGATGACAACCCGGAGTCTCAGGAGATGCTTGAGGAGCAGTTGGTCAGGCTGCTGACCCGAGAAGTCATGGATCTCATC
ACTGTTTGCTGTGTTGCTAAGAGAGGTGCTGAGCATAACTCTTCTGTTGCTGTGGACGGAGATGATGATGAAGCGATGG
CCACGGATGTGACTCCTCCTGCCAGCGCAGAGCTGACGGAGCTTGGAAAGTGTCTGATGAAGCAGGAGGATGTTTGCAC
TGCTCTGATGATCACTGCCTATGCATCCCTCTCCTGGAAAGACACCTTGTCCTGCCAAAGAACCACAACTCAGCTTTGC
TGGCCGCTGCTCAAACAGGTGCTTCCAGGCAATTTGCTGCCCGACGCCGTGTCCTGGTTTTTCACCAGTGTGCTGAAGG
GCTTACAGATCCACGGGCAGCACGATGGCTGCATGGCAGCTCTCGTCCATCTGGCTTTCCAGATCTACGAGGCCTTGCG
TCCTCGCTATGCTGAGCTGAAGGTGGTGATGGAGCAGATCCCAGACATCCAGAGGGACTCGTTGGAGCAGTTTGATTCA
AAGCTTCTTAACCCAACGCTGCAGAAAGTGGCAGACAAGCGCCGGAAAGATCATTTCAAACGCCTCATAACGGG
CitationCarraco G, Gonçalves AN, Serra C, Andrade RP. MicroRNA processing machinery in the developing chick embryo. Gene Expr Patterns. 2014 Nov;16(2):114-21. Epub 2014 Oct 1. DOI: 10.1016/j.gep.2014.09.002.
CopyrightCopyright © 2014 Elsevier B.V.
CommentsAuthors indicated the probe was amplified by PCR using the following primers: 5′-TCTTGCTGCCCAGCTCATCA-3′ and 5′-CCCGTTATGAGGCGTTTGAA-3′. Above sequence was extracted from NCBI accession number NM_001277652.1
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 1
Epiblast
 
4-6
stage 4
stage 6
Epiblast
Headfold
Neural Plate/Tube
Primitive Streak
 
7-12
stage 9
stage 9
stage 9
stage 9
stage 9
stage 9
stage 11
Forebrain
Head Mesenchyme
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Mesencephalon
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
Somites
 
13-18
stage 13
stage 17
stage 17
stage 17
stage 17
Cranial Ganglia
Eye
Forebrain
Hindbrain
Limb Buds
Midbrain
Neural Plate/Tube
Paraxial Mesoderm
Pharyngeal Arches and Clefts
Somites
Tail
 
19-24
stage 19
stage 23
stage 23
stage 23
stage 23
Diencephalon
Eye
Forebrain
Hindbrain
Limb Buds
Mesencephalon
Midbrain
Pharyngeal Arches and Clefts
Somites
Spinal Ganglia and Nerves
Tail
Telencephalon
 
25
stage 25
Eye
Limb Buds
Tail
 
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.53411

Mouse

EmageMGI:1913789
EurexpressMGI:1913789
MGI GXDMGI:1913789

Frog

Xenbase5947327

Fruit Fly

BDGPFBgn0031051

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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