GEISHA - A Chicken Embryo Gene Expression Database
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PRDM5
PR/SET domain 5

Gene
Official SymbolPRDM5
Official Full NamePR/SET domain 5
CGNC ID9070
also known asPR domain zinc finger protein 5|PR domain 5|PR domain containing 5, PR domain zinc finger protein 5, PR domain-containing protein 5
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_420628
PolypeptideXP_420628
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.55192
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human11107ENSG00000138738MIM:614161
Mouse70779ENSMUSG00000029913All phenotypic alleles (1):Gene trapped(1) MGI:1918029
Xenopus100487368854776
Zebrafish432371ZDB-GENE-040708-1ZFIN:ZDB-GENE-040708-1
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene422673
Ensembl Gene
KEGGgga:422673

Entry 1

GEISHA IdChEST431p9Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GGAGGAACCACCTGTTGTGACCCATTCTGAAGAGAGACCATTCCAATGTGAGGAATGCAAAGCTTTGTTCCGAACCCCA
TTCTCTCTACAAAGACATCTACTAATTCATAACAGTGAGAGGACCTTCAAGTGTGATCACTGTGATGCTACTTTCAAAA
GAAAAGACACCTTAAACGTTCATATTCAAGTTGTACATGATGGACATAAGAAATATAAGTGTGATCTCTGTGACAAAGC
TTTTGTGACACCCTCAGTCCTGAAAAGTCATAAAAAAACTCACACAGGTGAAAAAGAAAAAATTTGCCCATATTGTGGA
CAGAAATTTGCAAGCAATGGAACACTGAGAGTTCATATTCGAAGCCATACAGGTGAGCGTCCTTACCAGTGTCCTTACT
GTGACAAAGCTTTCAGCAAGAATGATGGACTGAAGATGCATATTCGCACCCACACAAGGGAAAAGCCATACCAATGTTC
TGAGTGTAACAAGGCTTTCACTCAAAAACGAGGCCTCGATGAGCACATGAGAACCCACACCGGAGAGAAGCCGTTTCAG
TGTGATGTTTGTGATTTGTCCTTCAGCCTGAAGAAAATGCTGATTCGACACAAGCTGACTCATAATCCCAATCGACCAA
TGGCAGAATGCCAGCTTTGCCACAAGAAGTTTACAAGAAATGACTACCTCAAAGTGCACATGGAAAATGTCCATGGTGA
AACTGACAGCTAATTATAATGTATGAGAAGAATGGATCTCATGTTCCAAAGTGTTCCACTTGTATGTGTACATACTCCA
GACTTCTCACCTGACTAGTAGACATAGTCAGGAGAAACAACTGTGTTTGCATGTTATTTTTCTCNACTTTTTTATATGC
TAGCAGGACAGAAAACAAGACTTGAAGTTCACTTGAAGTGAAGAACTACTTCACTTGAAGTAAAATGT
Commentsno specific expression detected at stage 11.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 17
Amnion
 
19
stage 19
Amnion
 

Entry 2

GEISHA IdPRDM5.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template Primer5’-AACTGGATGAGAACACAGAC-3’
Reverse cDNA Template Primer5’-AATTAACCCTCACTAAAGGTGACACTCAAAGGTCTCATG-3’cDNA Template Length838
Complete cDNA Template Probeshow
AACTGGATGAGAACACAGACTGCAGGCTCATGTGGGAAGTTCGTGGCAGTAAAGGTGAAGTCCTTTATATCCTGGATGC
AAGCAATCCACGCCATTCTAATTGGCTGCGTTTTGTCCATGAAGCTCCATCCCAGGAACAAAAGAATCTGGCTGCAATC
CAGGAAGGCGAAAATATTTTCTATCTTGCTGTGGACGATATTGAAACAGACACAGAACTTCTGATTGGTTACTTGGACA
GTGACATGGAAGAAGAGGAGGAGGATGAGGAGGAAGTAACTGTTATCCAGGAAGATGAAGACAGTGGCAACAATAAAGA
GGTGCAACTAGCTGGTGAAAAAGTTGCAGATCCCCTCACTTGTAAAGAGGACCATGCATGCCCAAACTGTGAGTCCAGT
TTTGCAAGCCAGGAGATTCTAGCTGAACATCTTCAGACATTGCACCAAAAACCCAGTGAGGAAAAAGAATTCAAGTGCC
GAAACTGTGGAAAGAAATTCCCTGTTAAACAAGCTCTACAAAGACATGTACTTCAGTGCACAGAGAATATCAACCCAGG
AGACTCTTCAAGAAGTTTTCAGTGTTCTGTTTGCAATACTTCCTTCAGCTCAGAATCGAGTTATGAACAGCACAAGGAG
GCATGCAGAGGGGATGCCAGATTCATATGCAAGGCAGATAGCTGCGGGAAGAGGTTCAAGAGTAAGGATGCCCTGAAAA
AACATAAGGAAAATGTTCATAGTGGAAATTCTAGGAAAAAGCTGACGTGTTCAGTGTGCAATAAGAAATGTTCCTCAAC
AACAAATCTCCAGGAGCATCGAAAGGTTCATGAGACCTTTGAGTGTCA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 12
Unlabeled
 
19-24
stage 19
stage 19
stage 22
stage 24
Allantois
Foregut
Head Mesenchyme
Pharyngeal Arches and Clefts
Sclerotome
Spinal Ganglia and Nerves
Unlabeled
 
25-26
stage 26
Head Mesenchyme
Leg Mesenchyme
Sclerotome
Spinal Ganglia and Nerves
Wing Mesenchyme
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.55192

Mouse

EmageMGI:1918029
EurexpressMGI:1918029
MGI GXDMGI:1918029

Frog

Xenbase854776

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-040708-1
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