GEISHA - A Chicken Embryo Gene Expression Database
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PPARGC1A
PPARG coactivator 1 alpha

Gene
Official SymbolPPARGC1A
Official Full NamePPARG coactivator 1 alpha
CGNC ID10714
also known asAVPGC-1ALPHA, peroxisome proliferator-activated receptor gamma coactivator 1-alpha|peroxisome proliferative activated receptor, gamma, coactivator 1, alpha|peroxisome-proliferator-activated receptor-gamma co-activator-1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Sequence Information
Genomic
RNANM_001006457
PolypeptideNP_001006457
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human10891ENSG00000109819MIM:604517MIM:604517
Mouse19017ENSMUSG00000029167All phenotypic alleles (7):Targeted, knock-out(3) Targeted, other(4) MGI:1342774
Xenopus100491667, 100462892494717
Zebrafish553418ENSDARG00000067829ZDB-GENE-080505-1ZFIN:ZDB-GENE-080505-1
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene422815
Ensembl Gene
KEGGgga:422815
GEISHA IdPPARGC1A.Trevers.2023Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
ACTATGCACTAGCATGGCCTCAGATGTGCCCATGACATTGTTGGCTGATGACATTGGCTTCTGCTAAATTAAATAGAAA
CTTCAGGAAAGTGAAAAGGAAAAAGAACAAAAACACAACAGTGAGCTACTACTATTCTGAGCATCAGAATTTCATCTGA
TCTGGGAGTCTCTAGACTGAGTCAGCAAAGTTGGGAATTGGCTGTGTGAATGTATAGATTGGGTATTCTATTACGGTTG
GGCATTCATGACTCCTCTTAAAGGTATGGCACACCTAACTATTTAATCTCCTTTCCCACTCCCAATCTTAGAAAACTGA
TTCCACCCCATGCCAGTGCAGTTGATTTGGAGGGCTGCATTCATTTTATCACCAGCATATGGTGGTTCTGAGAGATTCC
ACGGTCTGTCTGNTGGATGCTGTGCTTGATTTTGGGCTTCTAATTTCTCAGTAGATAGATAGCAATAAAA
CommentsThe complete cDNA template sequence was obtained from the information from the publication as described in Trevers et al. 2023.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
X-XIV
stage XIII
Area Opaca
 
1-3
stage 3
Primitive Streak
 
4-6
stage 5
Headfold
Primitive Streak
weak in primitive streak / weak in head fold
7-9
stage 9
Neural Plate/Tube
weak in neural plate
all
 
  

Mouse

EmageMGI:1342774
MGI GXDMGI:1342774

Frog

Xenbase494717

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-080505-1
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