GEISHA - A Chicken Embryo Gene Expression Database
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BATF
basic leucine zipper ATF-like transcription factor

Gene
Official SymbolBATF
Official Full Namebasic leucine zipper ATF-like transcription factor
CGNC ID7855
also known asbasic leucine zipper transcriptional factor ATF-like|basic leucine zipper transcription factor, ATF-like
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_421279
PolypeptideXP_421279
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.5195
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human10538ENSG00000156127MIM:612476
Mouse53314ENSMUSG00000034266All phenotypic alleles (3):Targeted, knock-out(3) MGI:1859147
Xenopus100492340, 1000369776258075
Zebrafish564589ENSDARG00000011818ZDB-GENE-041014-291ZFIN:ZDB-GENE-041014-291
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene423364
Ensembl GeneENSGALG00000010323
KEGGgga:423364

Entry 1

GEISHA IdChEST642f7Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GCGGAGCGGCAGAGGAAGCAGCAGAGCACGGGGCAGGAGGACAGCGTGCCTCTGGGCTGGGGAGTGCTAGAGCCCAGCA
AGCACTCCTGGGCAGAGGAGGAATCAAGGGAGAAAGAAGGAAGCCAGGCACACTGCAGGTGCAAAGGAAGCCAAGGAGG
TCCTGGGAGCCGGAGACAGGAGCCATGCCCCACAGCTCTGACAGCAGCGACTCCAGCATCTCCAGCCAGTCCCCCCCTC
CTAGCAAGCAGGACTCTTCTGATGACATGAGGAAAGTCCAGAGGAGGGAGAAGAACCGCATTGCTGCCCAGAAGAGCCG
CCTACGGCAGACCCAGAAAGCAGATACGCTGCACTTGGAGAGCGAGGACCTGGAGAGACAGAACGCAGCCCTGCGCCGG
GAGATCAAGCAGTTGACAGAGGAGATGAAGCACTTCACCTCGGTGCTGAGCTCCCACGAACCGCTCTGCTCCATCCTGG
CATCGCCCCCACCACCGCCCCCGGAGGTGCTTTACGCCGCGCACTCCTTCCACCAGCCCCACATCAGCTCCCCACGCTT
CCAGCACTGAGCCCGCTGGGGCGGCTAAGAACCAACTTGTGGGGCTCGCTTTTCCATCTGGAGAGGGGCGGACAGACAG
ACGCCCCTTCTCAAAGTGCGTACTCTGAGTGACTTTGTCTAAGACTTGTTCCCTGTTCAGAAATGGCAGAGCCACCAGC
AGGCATCTTCAGGCGGTTTCCAGCTTGGATCCTGGAAAGAGGAGGAATTCACAACAGAGCATCAGCCGTTCCCTGGTTC
TCGCCTGGGGACGTCGCANGCTGCCCCTGTGCCGGTGGCTGGCTGCAACGTGCAGCATCAAGAGCTCCAGGCACAGGAA
TGAAAACAAGGGTGGAGGGAAAGGTCGGGGGACACAAATACCAGGGTGAAACGGGTTTATTTTGGAAATAAAAAAGGAA
AATG
CommentsNo specific expression detected stages 7-25.
no images

Entry 2

GEISHA IdBATF.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerGAAAGCGGACAAACTTCACGAG
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGTTGAGCGATGGTGGGCTGCGcDNA Template Length484
Forward cDNA Template Probeshow
AGCGTAATNNTNGCCATACCACAATCACATAAAGGCACTGTGGACAGCTAATACCTAGGAGAGACTGAATGCAACCGTG
CCCCTGGAAAGCAGGCAGTTGACATAGGAGATGAGGCGCTTCACCTCGAGGCTGAGCTCCCACGAACCGCTCTGCTCCA
GCCTGGCATGGCCCCCACCACCGCCACCGGAGGTGCTTTACCCCGCACACTCCATCAGGCAGCGCCACTTCAGCGCCCC
ACCCTTCCAGCACTGAGCCGACTGGGGCGGCCAGTAAGCAACTTGTGGGGCACACTTTTCCATCAGGACAGGGGCTGAC
AGACTAACCCCCCTTCCCAAATCGCTGATTCAGAGTGACTTAGTCGAAGACTTGTTCCCGGTTCGAAGTGGGGCAGCCA
CCACCCCGCATCTTCGGCGCGGTTTCCCGACTTGGAGCCTGGAAAGAGGAGGACTTCACGAGCTCAGCATCAGCCGTTC
CCGGGTTCTCGCCTGGGGACATCGCAGGCTGCCCCGGTGCCGGTGGCTGGTTGCACTCTGCAGCTTCACGATCTCCAGG
TGCAGGATTGAGAGCAGGGGTGGAGGGCAAGGTCGGGGCACCTGGACCATTTCGTGAGGGTTAATTTTTAAAAAAAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
Area Pellucida
Primitive Streak
 
4-6
stage 4
stage 5
Area Opaca
Area Pellucida
Early Mesoderm
Hensen's Node
Notochord
Primitive Streak
 
7-12
stage 7
stage 9
stage 10
stage 12
Anterior Intestinal Portal
Blood Islands
Head Mesenchyme
Heart Tube
Lateral Plate Mesoderm
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
Somites
 
13-18
stage 13
stage 16
stage 17
Blood Islands
Head Mesenchyme
Heart Tube
Intermediate Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Paraxial Mesoderm
Widespread Expression
 
19-24
stage 23
stage 24
Spinal Ganglia and Nerves
Widespread Expression
 
25
stage 25
Spinal Ganglia and Nerves
Widespread Expression
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.5195

Mouse

EmageMGI:1859147
EurexpressMGI:1859147
MGI GXDMGI:1859147

Frog

Xenbase6258075

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-041014-291
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