GEISHA - A Chicken Embryo Gene Expression Database
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TFCP2L1
transcription factor CP2 like 1

Gene
Official SymbolTFCP2L1
Official Full Nametranscription factor CP2 like 1
CGNC ID8841
also known astranscription factor CP2-like protein 1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
Gallus-Browse
Sequence Information
Genomic
RNAXM_422087
PolypeptideXP_422087
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST Profile
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human29842ENSG00000115112MIM:609785
Mouse81879ENSMUSG00000026380All phenotypic alleles (2):Targeted, knock-out(1) Gene trapped(1) MGI:2444691
Xenopus549628, 380069, 379687997198
Zebrafish431761ENSDARG00000029497ZDB-GENE-040704-58ZFIN:ZDB-GENE-040704-58
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene424238
Ensembl Gene
KEGGgga:424238
GEISHA IdTFCP2L1.Trevers.2023Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
TCATCCCCGCCGTCCCCAAGATGCTGTTTTGGCACACGCAGCCGGAGCACTACAACCAGCACTCGACCGGCAGCTACCT
GCGAGATGTCCTTGCGCTGCCCATCTTCAAGCAGGAGGAACCGCAGCTGTCTCCTGAGAATGAAGCCAAACTGCCTCCG
TTTCAGTACGTCCTTTGCACAGCCACATCCCCTGCTGTGAAGCTGCACGAAGAAACCCTGACCTACCTCAACCAAGAGT
ATAATTCGTGTAGTTTTCCATGACCGACGCCTGCAATACACAGAGCATCAGCAGCTGGAGGGCTGGAGGTGGAGTCGGC
CTGGGGACCGCATCCTTGATATAGATATTCCGCTGTCAGTTGGAATCTTGGATCCCAGGCCAGCCCCACGCAGTTGAAC
ACTGTTGAGTTCCTGTGGGATCCATCAAAGAGAGCCTCAGCATTCATTCAGGTGCATTGTATCAGCACAGAATTTACTC
CACGGAAACATGGAGGAGAGAAAGGGGTGCCTTTCCGGGTGCAGATCGACACCTTTAAGCAGAATGAAAATGGTGAATA
CACAGAGCACTTGCATTTCTGCCAGCTGCCAGATCAAGGTGTTCAAGCCTAAAGGAGCAGACAGAAAACAGAAGACTGA
CAGGGAAAAACATGGAGAAGAAGACCACCCAAGAGAAGGAGAAGTATCAGCCTTCCTATGAGACAACTATTCTCACAGA
GTGCTCTCCCTG
CommentsThe complete cDNA template sequence was obtained from the information from the publication as described in Trevers et al. 2023.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
X-XIV
stage XIII
Area Pellucida
 
1-3
stage 3
Area Pellucida
Hensen's Node
Primitive Streak
anterior primitive streak / Hensen's node / central area pellucida
4-6
stage 5
Germ Cells/PGCs
Headfold
Primitive Streak
head fold / germ wall margin / weak in primitive streak
7-8
stage 8
Blood Vessels
Germ Cells/PGCs
excluded from most embryonic regions / area vasculosa / germ wall margin
all
 
  

Mouse

EmageMGI:2444691
EurexpressMGI:2444691
MGI GXDMGI:2444691

Frog

Xenbase997198

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-040704-58
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