GEISHA - A Chicken Embryo Gene Expression Database
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KALRN
kalirin, RhoGEF kinase

Gene
Official SymbolKALRN
Official Full Namekalirin, RhoGEF kinase
CGNC ID8925
also known askalirin
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNAXM_001234054
PolypeptideXP_001234055
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human8997ENSG00000160145MIM:604605
Mouse545156ENSMUSG00000061751All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(1) Gene trapped(1) MGI:2685385
Xenopus548783, 1001583441014005
Zebrafish678652ZDB-GENE-060421-7244, ZDB-GENE-100921-4ZFIN:ZDB-GENE-060421-7244, ZFIN:ZDB-GENE-100921-4
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene424253
Ensembl GeneENSGALG00000011744
KEGGgga:424253
GEISHA IdKALRN.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTTTGCCTTGTGGTCTGGACG
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGTAGGAGGAGGAAGAGGTGTGTGAGcDNA Template Length898
Forward cDNA Template Probeshow
ATAAACAGNTGCTGAAAGCATCGTAGATATTGGAAACAAAACAGGGAGTGGATCAAAAATATCCGAGAAGTCATCCAAG
AAAGAATTATCCATCTGAAAGGAGCTCTGAAAGAGCCAATTCAGCTCCCCAAGACACCAGCAAAGCAGCGAAACAACAG
TAGAAGAGATGGAGTAGATGATGCAGACAGCCAAGGAGATGGAAGCAGTCAACCTGACACCATTTCCATTGCATCCAGG
ACATCACAGAATACAGTGGACAGTGATAAGTTGTCTGGAGGGTGTGAACTAACNGTGGTGCTCCAGGACTTCACGGCGG
GCCACAGCAGCGAGCTGAGCATTCAGGTGGGGCAGACAGTGGAGCTGCTGGAGAGGCCAAGTGAAAGGCCAGGCTGGTG
CTTGGTGCGGACCACGGAGCGGAGCCCACCTCAGGAAGGCCTGGTCCCCAGCAGCGCTCTCTGCATTTCCCATTCCCGC
AGCAGCGTGGAGATGGATTGCTTCTTCCCTTCAGGAAAAGAGGCATATTCAGTCTCTTCCAATGAAAACGGGGGCAAGT
CCGATTCAGTGGCCAACTTACAGCCCCAGCCATCCCTCAACTCCATCCAGAGCTCTCCCGGCCCCAAGCGCTCGACCAA
CACGCTGAANAAATGGCTGACGAGCCCCGTGCGCCGGCTGAACAGCGGGAAGGCCGAGAGCAACATCAAGAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
stage 6
Area Pellucida
Early Mesoderm
Epiblast
Hensen's Node
Neural Plate/Tube
Primitive Streak
Low level expression.
7-12
stage 7
stage 9
stage 9
stage 10
stage 10
stage 11
stage 11
Extraembryonic Mesoderm
Forebrain
Head Mesenchyme
Headfold
Heart Tube
Hindbrain
Midbrain
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
Somites
Dorsal view.
Ventral view.
13-18
stage 13
stage 13
stage 16
stage 17
Anterior Intestinal Portal
Anterior/Second Heart Field
Blood Islands
Central Nervous System
Eye
Forebrain
Head Mesenchyme
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Lung
Midbrain
Somites
Widespread Expression
Dorsal view.
Ventral view.
19-24
stage 23
Endoderm
Mesonephros
Widespread Expression
 
25
stage 25
Widespread Expression
 

Mouse

Emage
MGI GXDMGI:2685385

Frog

Xenbase1014005

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-060421-7244, ZDB-GENE-100921-4
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