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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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PLXNB2
plexin B2

Gene

Official Symbol	PLXNB2
Official Full Name	plexin B2
CGNC ID	52617
also known as	plexin-B2\|LOW QUALITY PROTEIN: plexin-B2
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_423623
Polypeptide	XP_423623
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.8211

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	23654	ENSG00000196576		MIM:604293
Mouse	140570	ENSMUSG00000036606	All phenotypic alleles (5):Chemically induced(1) Targeted, knock-out(1) Targeted, other(3)	MGI:2154239
Xenopus	550076, 494999			856508
Zebrafish	561433, 100333657	ENSDARG00000003811, ENSDARG00000036985	ZDB-GENE-030131-8917, ZDB-GENE-080902-1	ZFIN:ZDB-GENE-030131-8917, ZFIN:ZDB-GENE-080902-1

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	425938
Ensembl Gene
KEGG	gga:425938

Entry 1

GEISHA Id	PLXNB2.Alev.2010	Data Source	Publication
Complete cDNA Template Probe	show `AGCTGCTTTTGCATCACCTTTTCCAGAAGTGAGGAACTGAAATTTTTTCAAAGTGCCACAGAGCTAAATCACCTAACAG TGGATAATGACACTGGCATAATCTATTTGGGAGTGGTAAACGCTCTGTATCAGCTTACAGAAAATCTGGTGGTACGAAT ACATGTGGAAACAGGGCCAAGAAAGGACAACAAAAAATGCACACCTCCCATTGAAGAAAATCAATGTAAGGAGGCAGTA CTGACTGACAATTACAACAAATTATTGTTGCTGAACAAGGAAAATAAGACAATTGTGGTGTGTGGAAGCCTTTTTAAAG GGATTTGTGCCACCAGAGATCTAGAAAACATTACCAAAGTTACGCATTATGTGGAAACTAGTGGAGAGAAGTCCTTTGT AGCAAGCAACGATGAGAATGTATCGACGGTGGGGCTGATCACTTCCTTGGACAATGATCAGGTGCTGTTTGTTGGGAAA GGGAATGGACCAAAT`
Citation	Alev C, Wu Y, Kasukawa T, Jakt LM, Ueda HR, Sheng G. Transcriptomic landscape of the primitive streak. Development. 2010 Sep 1;137(17):2863-74. Epub 2010 Jul 28.
Copyright	Published by The Company of Biologists 2010. This material is protected by a copyright retained by the authors. Permission granted by Dr. G Sheng.
Comments	FORWARD PRIMER AGCTGCTTTTGCATCACCTT REVERSE PRIMER ATTTGGTCCATTCCCTTTCC

Stage

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Comments (click to highlight)

stage 4

Early Mesoderm
Primitive Streak

Entry 2

GEISHA Id	PLEXINB2.Mauti.2006	Data Source	Publication
Complete cDNA Template Probe	show ATGGCTCTATGGATCTGGACTCTAAGCATTTTGAGCTGCTTTTGCATCACCTTTTCCAGAAGTGAGGAACTGAAATTTT TTCAAAGTGCCACAGAGCTAAATCACCTAACAGTGGATAATGACACTGGCATAATCTATTTGGGAGTGGTAAACGCTCT GTATCAGCTTACAGAAAATCTGGTGGTACGAATACATGTGGAAACAGGGCCAAGAAAGGACAACAAAAAATGCACACCT CCCATTGAAGAAAATCAATGTAAGGAGGCAGTACTGACTGACAATTACAACAAATTATTGTTGCTGAACAAGGAAAATA AGACAATTGTGGTGTGTGGAAGCCTTTTTAAAGGGATTTGTGCCACCAGAGATCTAGAAAACATTACCAAAGTTATGCA TTATGTGGAAACTAGTGGAGAGAAGTCCTTTGTAGCAAGCAACGATGAGAATGTATCGACGGTGGGGCTGATCACTTCC TTGGACAATGATCAGGTGCTGTTTGTTGGGAAAGGGAATGGACCAAATGATAATGGGATAATAATCAGCACTCGGCAGC TCCACGAGAAGGATGGGAAAGACATTTTTGAAATGTATTCGGACTCGGCAGCTGTTAAGTCAGCATATCATTCTTCAAG CACACAACAATTTGTGACAGTCTTTGAGGATAAAAATTACGTTTACTTCATTTTTAACCAGCAAGAGAAGCAGCCTGTC AATAACCGCACACTAATTGCACGTCTTTGCAAAGACGATGCCCATTATTATTCCTACTTTGAAATGGACTTGGGTTGCA AAGATGAGGACGGTTCCTATGATCACTGTCATTCTGCTTACGTCACCACCCCAGGAGAAGAGCTGGCCAAGAGCATGGC TCAGCAAAGGCAAACTACAGATTCTGCCTCAGATGACAAAGAGCTCATTGCACTCTTCAGCAAAGTAAACAAAGATAAT GGCTCCCTAAAATCTGCCATGTGTGTGTTTTCGTTGAGGCACATCAATGAAAAAATGGAGAAAAACCGGGATGATTGCT ACACAAATAAGAATACCAGCATGTTTTACAAACTCTTTGCAGTAGAAAACCCATGTGGACAACATGGACAGAATGCAAG CAAAAATTTCCCCTGTGGCTCTGAACACTTACCATACCTCTTGGGAAGTAAAAATGGTGTTATAGAGAAGCCAGTATTA CAAAAAGAAGGGATGAATCTCACGGCTGTTACAGTGACTGTGGAGAATGGGCACACCGTGGCCTTTCTGGGGACTTCGG ATGGAAAAATTCTTAAGGTGTTCCTGTCATCCACTGTAATCGAGTACAGCTCTCTGACTATTGAACTAAATAAACCCAT AAAGAATGATCTGGTCCTTGACAAAACCCAAGAATATCTATATGTGATGACCACAGACAAGGTGCATCGCCTTCCCGTA CAGCAGTGCCACAAGTATTCAGACTGTGAGAAGTGCACGCAGGCTCAGGACCCGTACTGCGGCTGGTGTGTGCGGGAGG GCAGGTGCACAAAGAGGGCAGACTGTGAAATGGCTGATAAGGAGAACGACTGGCTCTGGAGTCCAAGTGGCACATGTAT GACTATCATCAGTGCAGACCCTCAAAACATGAGTCGTAGAGCCCCTGCTAAGGTGAAACTCACAGTAAGTCCACTGCCA ACTTTGAGCACCAGTGACAAACTTTGGTGTACCTTTGGTGAAACAAGCCATCGTGCTCAATTAAATGAAGGAGTTATTA TCTGTGACCCACCTGATATGATTCCGCCAACACCGAAAGGTCAAGATCACGTTTCAGTTCCATTACAGTTAACCTTTGG AGAGAACAAGATATTTTTTGCATCACATACTTACCCTTTTTATGACTGTGAAGAAGCAATGAATCTTTATGAAAACCAG CCATGCTATTCTTGTGCAAGCAATAGATGGAATTGCCAGTGGGACTGGAAGAAACATATCTGTGAAGAATCTTCTTCAG CACAGGATGTGATCAAACAAAATATGGAAGAAGAATGCCCACAGTTTCTAAACCCTAACCCATCAATAGTACCTATGGA GTACCGAACAACAGTGCATTTTGAGGGAAGACATCTAGCTTATTATCAGGATGAAAAATTTATGGTTGGAAACAACCAA TTTGAATTTGAAGCTTCTGTTGAGGCAGCAGATGAAGGAAGATTTTCATTCACGACTAAAGAGTTCTCCTATAGTGCAA ATGAAACCTTAAAACTTAAATTATCCATGAGAACGGGGAAGGTTAAGATTGACAGCAAACTGATGGTGACTCTGTACAA TTGCTCCTATGGAAGAAGTGATTGCAGTTTGTGTCTTGCCGCCCATGAAGACTATAAGTGTGTCTGGTGTGAAGAGGAT GGCAAGCCAAGCAAGTGTGTGTATGAGAAGCTGTGTCGTGCTCCTCCCACCAACACGTGTCCTCATCCAGAAATCACTC GCATTGAGCCAAAGACTGGACCACTGGATGGTGGAATTCTTTTGACCATAATGGGATCTAATTTGGGAATAAAAGCAGA AGATGTAAAAAATATAACGGTGGCAGACAAGGAATGTGTTTTCAAGGAGGAATTCTACTCTGTTTCCACAAGGATTGTG TGTCAAGTTGGAGAAATGAAGGTTCCTAAACAAGGTCAAATTGAAGTTAACATCAATGGAAAATTAGGTAAATCACCAA GTGATGTGCAGTTTACATACCAGGACCCTCACCCTACTGGCATAAGACCTCAAAGTGGTCCACAAGCAGGTGGAACCAC ACTTACCATCACTGGTATGAACCTGGCAACTGGTTCCAAGAAGGATGTTCGTGTTCTTCTCGGTAGCCAGCCTTGCAAT GTCACTGAATTTGGAGATGAGATTGTTTGCATTACGGGACGTAATAGCAAGGTTGAAGCTGTTGGAGTCACAATGCACT ATGGGGGAACAAAAATTGTTGTACCAGTGCATTTTTCATACAGTGAGAATCCTACTGTCACCAAATTCAAGCCCATAAA TAGCTTCAGCAGTGGAGGGAGAAATATTACGGTAACTGGAACTGGGTTTGAACTCATCCAGAGTTTCTCACTGATGGTA CATGCGGAGCGTCCAGAAGCAGGCAAACTGAGCTCCAAAACGTTTGTTGGAAACTGTGTTACAAGACTTAATGAAACCA CAGTGGTTTTTTCTTCACTACCAGTATTGGAAGATCCAGAAAACTATAACATTACCACTATTATTCTAATGGATCATTA TCAGTTGGTTGTAAAAAATGAGAGCCATTCATTTACATATGTTGCAGACCCGACTTTTGAAAATTTCACAGATGGCATC AAAAAGCAAGTCAACAAACTTATAAATGCAAAGGGCAGTAACCTGAACAAAGCCATGACGATAGATGAGGCCCAGGCTT TTGTAGGTGATGAGCCATGCAACATAAAAACACTGACCGAAACAGACTTATATTGTGAGCCACCTGAAGTACAGCCACA ACCAAAGAAAAGGCAGAAGAGGGATATGATCAATAACCTTCCAGAATTCATTGTGAAGTTTGGACTCCGTGAATGGGTC CTTGGAAGGGTGGAATATGATACACGTGTGAGTGACATCCCCCTGAATCTTATTTTGCCACTGGTACTTATTCCTATGA TAGCAATCATCATCATTTCTATCATCTGTTACAGACGGAAGAGCCAGCAAGCAGAACGAGAGTATGAAAAAATTAAATC ACAACTTGAAGGCCTGGAGGAGAGTGTCAGAGACCGGTGCAAGAAGGAATTCACAGATCTAATGATAGAGATGGAGGAT CAGACAAATGATGTAAACGAAGCTGGAATCCCAGTACTGGACTACAAAACGTACACAGACAGAGTCTTCTTCTTGCCTT CCAAAGATGGGGAGAAGGACGTGATGATTACAGGGAAGCTGGACATTCCAGAGGCTCGGCGGCAGACTGTGGAGCAGGC TCTGAACCAGTTCTCCAACCTCCTCAATAGCAAATCATTTCTCATTAATTTTATTCACACTCTGGAAAACCAAAGGGAG TTCTCTGCTCGAGCTAAAGTGTATTTTGCCTCTCTACTGACGGTCGCTTTACATGGAAAACTAGAATACTATACTGACA TCATGAGGACTCTGTTCTTAGAACTGATGGAGCAGTACGTGGTGGCCAAAAACCCAAAGTTGATGCTAAGAAGATCTGA AACAGTTGTTGAGAGAATGTTGTCTAACTGGATGTCTATTTGTTTATATCAGTACCTCAAGGACAATGCTGGGGAGCCT CTTTACAAATTGTTCAAAGCCATCAAACACCAGGTAGAAAAAGGTCCAGTGGATGCTGTACTGAAGAAAGCCAAGTATA CACTGAATGATACAGGCTTACTAGGAGATGATGTAGAGTATACACAGTTGACAGTAAATGTGTATGTACAAGATGGAGG AACTGATTCTACACCTGTGAAAGTGCTGAACTGTGATACTATATCACAAGTAAAGGAAAAGATAATAGACCAAGTCTAT CGAAATCTGCCGTGTTCTCAGTGGCCAAAAGCTGAGAGTGTAGCTCTTGAGTGGCGTCCAGGTTCTACTGCACAGATCC TCTCAGACTTGGATTTAACTTCCCAAAGAGATGGCAGATGGAAACGTATCAACACACTGATGCATTATAATGTCCGAGA TGGTGCCACACTCATCTTATCAAAAATGGGAATTTCCCAGCAGCCAGAGGATAATCAGCAAGATGTCCCAGGGGAAAGG CACGCGCTTCTGGAAGATGAAAATAAGGTCTGGCACCTAGTCCGGCCCGTAGATGAAATTGATGAAAGCAAATCGAAGA GAGGCAGTGTGAAAGAAAAAGAAAGAACCAAAGCTATTACAGAAATCTACCTGACAAGACTTCTGTCTGTGAAGGGAAC ACTTCAGCAGTTTGTAGATGACTTCTTTCATAGTGTGCTCAACTCAAACCATGTAGTGCCACCAGCTGTGAAATACTTC TTTGACTTTCTTGATGAGCAAGCAGAAAAACATGACATCAAGGATGAAGATACCATTCACATCTGGAAAACAAACAGCT TGCCTCTTAGATTCTGGGTAAACATACTGAAAAATCCCCACTTCATCTTTGATGTTCACGTTCATGAAGTAGTGGATGC TTCCTTGTCAGTCATTGCACAGACTTTCATGGATGCTTGCACAAGAACAGAGCACAAATTAAGCAGAGATTCTCCAAGT AATAAATTACTTTATGCGAAAGAGATCTCTAATTATAAGAAAATGGTGGAAGATTACTACAAAGGTATTCGTCAGATGG TACCAGTTAGCGACCAAGATATGAATACCCATCTAGCAGAAATCTCTAGGGCACATACCGATTCCTTAAACACGCTTGT GGCTCTACACCAACTCTACCAGTACACTAACAAATACTATGATGAGATTATAAATGCACTTGAAGAGGATCCAGCTGCA CAAAAAATGCAGCTCGCCTTCCGTTTACAGCAAATAGCAGCTGCGTTAGAGAATAAAGTGACTGACCTTTGACTCGAAA GCCGCAATAAAGAAATCTGATCTGAAGATGTTCAAATTCATTCTTCCTATTAAGGAAATAGTGTTCTATTTTTTAATGT GTAATTACAACTTTAAATGAAAGATTTCATGTTTTTTTGATAGCAGAGGTGTAATGTAAAAAATTTTTACTGTAAATTA TGCTTCTAATTAAAAGCTGTGTTGTGTGTAAATGAATCTTCTGTGGGAAGGAGAGTCCTTTGGCTGGGGGCAGGGTGGG GGGCGGAGGAAGGCAAGTCTGTAGTTCAGTTAATTGCATAGAATCTAAGACATCAGCATTTAGAATTCATTATGCAAGT AAACTCAATATTATAGCATCCTTTATATTTTAAGCAATATTTGTACTAGGAAAATAACAGCATATTCAGAGAACCATGC AATATCCCTTTTTATTTTGATAACTGGAAATTGACTTCCGCGTAGCTCCAAAACTTCGTCTGTGCTCATAATGAACGTA GTAAACAACGTGTCCGATTCCTCTGTGAGATCTGCAAATGGGTTTTGCTGCCACACACAGTTCTTACGTTAATTATTTA TGCCCACGGTAATGCACAGTACTGCGCCCAGCACGGTTGGCTGCGACGGAACTGACAGTGATGCCGTGGCTGTGAGGAG TTTTCTCCTGAAAGAGGGTCTCTTTTGGTTCAGAAATCACCGCAAAGGAGTATTAAATCTTCACGACCCTTTGTTATCA ATGTGAGTTTTATGATATATGCTAATGTGCCTTACTTGTACTAATTCTGTGAATCTGATGAATGGTTTTGTAAAAAGAA GCAGATCAGAAAAAGAAATATTTATGTGCTATTGAATGACTTTTGTGTGAAAACCATGACCAGCAGAATGCTTGTAATT AGCCGCTTGCCGAGAGTGTGTTGTTTAACATGATCTGATTATGTATAATATCTTATTTTAGAATGGTTCTGATGATTTT TTTTTATTTGGAACTGTCCTAGGGTTACCATCACTTGTTTTTATTGTATTTGTGATGTAAAATACTAGTACAATATTGG AAAACCTGTATGCCCACGTGTTGAAAACCACTCCGTTTTGAGACTTGGAATTCCACATCTGATCAAACAACACCATCAA CCCATAGCAAAGACAGTCAAAATCACTAGTCAGAAGTGTGCGCTTACAACGTATGTAAGCTACATACAAATCCAAAAGC TCGGTACGCCTTCTTCAATTGCTGTATTGCACATCAGAGTTCTTCGTTCCCTTTTGTCTCGCCAGCGTTGGCAGTGAAG TAGCATTTTAAGGAAGCGCTGCCATTGGTGTGAGTTCACTCCCTGCCCTGCCCAGCGCCCACCACCAGCCTCAGCCAGC TGACCCAGGCAGCCACAAGACCATAAGGTCAGTTCTACCGTTGGCTGATTTGTATTTTTTTCCTTTCTGAAAGCTTCCT GGTATTTGGCAGCGGATCTTCCCATCAGCTTCAGAAATGGAAAGCCTCACCAGTGCCGGTCCTGTGGGCTGGGAGGGCT TTTGTTTTGGGTTTTTCGTCCTCGATTTGTTGCATTTGCGTATAACCGTTCCTGACCTTGCCTGGGCTGTAAGTTATTG TACACTGTGTAGGACTGAGGTACATGACTGCTACATAAAGCTGCTTTGCCAGCTACTTCATCAACAAAAGCATCTTAAT TTCATGGCTAATCTGTTTCTTTGTCGTTATTTGTAAATCCTGTTAATTGTAAATCAAATACAATGTTGTTTTTTTTTCC ACAAAAGAAAAAAAGAGACGACCACCCAAAAATTGACAACAAACAAACTCAAAAA
Citation	Mauti O, Sadhu R, Gemayel J, Gesemann M, Stoeckli ET. Expression patterns of plexins and neuropilins are consistent with cooperative and separate functions during neural development. BMC Dev Biol. 2006; 6: 32. Published online 2006 July 17.
Copyright	), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # XM_423623.3).