Geisha

home

contact

A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

Quick Search

Data Class

Enter Text:

Gene Family QuickSearch

	Transcription Factors
	Growth Factors
	Receptors
	MicroRNAs

Human Disease Gene Search

	Downloads
	Protocols
	About GEISHA
	Contact Us

	Transgenic Birds
	Model Organism Databases
	Gene Expression Databases
	Genomic Resources
	Anatomical Atlases
	Chicken Stage Series

CELF4
CUGBP Elav-like family member 4

Gene

Official Symbol	CELF4
Official Full Name	CUGBP Elav-like family member 4
CGNC ID	52922
also known as	BRUNOL4, CUGBP Elav-like family member 4\|CUG-BP and ETR-3-like factor 4, CUG-BP and ETR-3-like factor 4 isoform 2 , BRUNOL4, CELF4
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_001231324
Polypeptide	XP_001231325
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.29507

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly	39527			FBgn0264001
Human	56853	ENSG00000101489		MIM:612679
Mouse	108013	ENSMUSG00000024268	All phenotypic alleles (3):Targeted, other(2) Transgenic(1)	MGI:1932407
Xenopus	779831, 100190784			5873698
Zebrafish	436835	ENSDARG00000070045	ZDB-GENE-040718-300	ZFIN:ZDB-GENE-040718-300

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	426889
Ensembl Gene
KEGG	gga:426889

Entry 1

GEISHA Id	CELF4.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	5’-CGGGACAAATGGGCATGTTC-3’
Reverse cDNA Template Primer	5’-AATTAACCCTCACTAAAGGTCCTTTGGCCTCTTCAGCTG-3’	cDNA Template Length	766
Complete cDNA Template Probe	show CGGGACAAATGGGCATGTTCAACCCCATGGCCATCCAGTTTGGAGCATATGGCGCCTACGCACAGGCACTGATGCAGCA GCAAGCCGCGATCATGGCTTCGGTGGCGCAGGGCGGATACCTGAACCCCATGGCAGCCTTTGCTGCAGCCCAGATGCAG CAGATGGCGGCTCTGAACATGAATGGCCTGGCAGCTGCCCCCATGACTCCAACCTCAGGTGGAAGCACGCCTCCTGGCA TAACTGCACCAGCTGTGCCTAGCATCCCATCTCCAATTGGGGTGAATGGTTTCACTGGCCTCCCGCCGCAGGCTAACGG GCAGCCCGCCGCAGAAGCCGTGTTTGCTAATGGCATACACCCTTACCCAGCACAGAGCCCCACTGCAGCAGACCCCTTG CAGCAAGCCTACGCTGGAGTGCAGCAGTACGCAGGTCCTGCTTATCCTGCTGCTTATGGCCAGATTAGCCAAGCGTTCC CACAGCCACCTCCCATGATACCACAGCAACAGAGAGAAGGACCAGAGGGCTGTAACCTGTTTATCTACCATCTGCCCCA GGAGTTTGGGGATGCTGAGCTGATGCAGATGTTCCTGCCTTTCGGTAATGTCATCTCCTCGAAAGTGTTTGTGGATCGG GCGACAAACCAAAGTAAATGCTTTGGTTTTGTGAGTTTTGACAATCCTGCCAGTGCCCAAGCTGCCATCCAAGCTATGA ATGGCTTCCAGATTGGCATGAAGAGGCTGAAGGTGCAGCTGAAGAGGCCAAAGGA

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

7-12

stage 11

Unlabeled

13-18

stage 17

stage 18

Head Mesenchyme
Neural Plate/Tube
Pharyngeal Arches and Clefts
Unlabeled

19-24

stage 24

Foregut
Head Mesenchyme
Leg Mesenchyme
Myotome
Neural Plate/Tube
Pharyngeal Arches and Clefts
Spinal Ganglia and Nerves
Wing Mesenchyme

25-27

stage 25

stage 27

Duodenum
Forebrain
Foregut
Head Mesenchyme
Hindbrain
Leg Mesenchyme
Midbrain
Myotome
Pharyngeal Arches and Clefts
Spinal Cord
Spinal Ganglia and Nerves
Wing Mesenchyme

Entry 2

GEISHA Id	CELF4.Brimacombe.2007	Data Source	Publication
Complete cDNA Template Probe	show ATGGCGCGCCCGATTCAGGTGAAACCAGCGGACAGCGAAAGCCGAGGAGAAGACAGAAAACTCTTCGTGGGCATGCTTA ATAAGCAGCAGTCAGAAGATGATGTGCGCAGGCTATTCGAGGCATTTGGCAACATTGAGGAGTGCACAATCCTTCGGGG ACCCGATGGAAACAGCAAAGGCTGTGCATTTGTGAAATACTCTTCGCATGCAGAGGCCCAAGCAGCTATCAATGCCTTG CATGGCAGCCAGACAATGCCGGGAGCCTCTTCAAGCCTGGTGGTGAAGTTTGCAGATACAGACAAGGAGCGTACAATGA GGCGCATGCAGCAAATGGCGGGACAAATGGGCATGTTCAACCCCATGGCCATCCAGTTTGGAGCATATGGCGCCTACGC ACAGGCAATGCAGCAGCAAGCCGCGATCATGGCTTCGGTGGCGCAGGGCGGATACCTGAACCCCATGGCAGCCTTTGCT GCAGCCCAGATGCAGCAGATGGCGGCTCTGAACATGAATGGCCTGGCAGCTGCCCCCATGACTCCAACCTCAGGTGGAA GCACGCCTCCTGGCATAACTGCACCAGCTGTGCCTAGCATCCCATCTCCAATTGGGGTGAATGGTTTCACTGGCCTCCC GCCGCAGGCTAACGGGCAGCCCGCCGCAGAAGCCGTGTTTGCTAATGGCATACACCCTTACCCAGCACAGAGCCCCACT GCAGCAGACCCCTTGCAGCAAGCCTACGCTGGAGTGCAGCAGTACGCAGGTCCTGCTTATCCTGCTGCTTATGGCCAGA TTAGCCAAGCGTTCCCACAGCCACCTCCCATGATACCACAGCAACAGAGAGAAGGACCAGAGGGCTGTAACCTGTTTAT CTACCATCTGCCCCAGGAGTTTGGGGATGCTGAGCTGATGCAGATGTTCCTGCCTTTCGGTAATGTCATCTCCTCGAAA GTGTTTGTGGATCGGGCGACAAACCAAAGTAAATGCTTTGGTTTTGTGAGTTTTGACAATCCTGCCAGTGCCCAAGCTG CCATCCAAGCTATGAATGGCTTCCAGATTGGCATGAAGAGGCTGAAGGTGCAGCTGAAGAGGCCAAAGGATGCCAACCA TCCCTACTGA
Citation	Brimacombe KR, Ladd AN. Cloning and embryonic expression patterns of the chicken CELF family. Dev Dyn. 2007 Aug;236(8):2216-24.
Copyright	Copyright © 2007 Wiley-Liss, Inc.
Comments	The paper gives two accession numbers (EF520344 and EF520345)and we have selected the longer (EF520345).