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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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SLC30A5
solute carrier family 30 member 5

Gene

Official Symbol	SLC30A5
Official Full Name	solute carrier family 30 member 5
CGNC ID	10966
also known as	ZnT5, zinc transporter 5\|solute carrier family 30 (zinc transporter), member 5\|znT-5
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_001031419
Polypeptide	NP_001026590
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.22364

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	64924	ENSG00000145740		MIM:607819
Mouse	69048	ENSMUSG00000021629	All phenotypic alleles (5):Targeted, knock-out(2) Targeted, other(3)	MGI:1916298
Xenopus	548665, 100126632			962721
Zebrafish	436594	ENSDARG00000051921	ZDB-GENE-040718-6	ZFIN:ZDB-GENE-040718-6

Gene Ontology

Molecular Function	zinc ion transmembrane transporter activity
Biological Process	cellular zinc ion homeostasis, cobalt ion transport, response to zinc ion
Cellular Component	apical plasma membrane, Golgi apparatus, integral component of membrane, nucleolus, secretory granule

Links to other databases

Entrez Gene	427173
Ensembl Gene
KEGG	gga:427173

Entry 1

GEISHA Id	ChEST64c20	Data Source	GEISHA ISH Analysis
Complete cDNA Template Probe	show TACCAGCGCCCGGTTACTCGGTATATTGTGCTGCTGTGCTTCGCCAAGTTTCTGAAGGCGGTGGGCCTCTTTGAATCCT ACGATCTCCTGAAAGCAGTCCATCTTGTGCAGTTTATTTTCATAGTGAAGCTGGGGTCTGCATTTTTTATGGTCTTATT TCAAAAACCATTTTCTTCTGGAAAAGTGGTAACCAAGCATCAGTGGATCAAAATTTTTAAGCATGCTGTTGTGGGATGT ATCATTTCACTCTTATGGTTTTTTGGCCTAACTCTTTGTGGACCACTGAGAACACTGTTGCTGTTTGAACACAGTGATG TGGTTGTGCTGTCACTCCTTAGTGTCTTGTTCACAAGCTCAGGTGGAGGACCAGCCAAGACAAGAGGTGCTGCATTTTT CATCATCGCTGTCATCTGCCTTCTGCTTTTTGATAATGATGACCTCATGGCTAAAATAGCAGAACATCCTGAGGGACAT CATGACAGTGCTCTTACACATGTTCTGTATACAGTCATTGCTTTCCTGGGTGTTGCAGATCACAAGGGAGGAGTGCTGC TTCTGGTACTGGCACTGTGTTGCAAAGTTGGTTTTCACATGGCTTCTCGAAAGCTTTCTGTCGATGTAGGTGGAGCCAA ACGTCTTCAAGCTTTATCTCATCTTGTTTCTGTGCTTCTGTTGTGCCCGTGGGTCATTGTCCTCTCTCTGACAACAGAG AGCAAAGTTGAGTCTTGGGCTTCTCTCATCATGCCTTTCATAACCGTGATATATTTGTGGGAAATTGGAATTCCTAATG GTGGAATCCATATGCCCTGCCAAGATGGAATTTCCAAATGTGCTCGATAGGATCCTC

Stage

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Location (click to highlight)

Comments (click to highlight)

13-18

stage 15

stage 18

Endoderm
Neural Plate/Tube
Tail

Sections pending.

19-24

stage 24

Head Mesenchyme
Limb Buds
Neural Plate/Tube
Widespread Expression

Sections pending.

stage 25

Head Mesenchyme
Neural Plate/Tube

Going to keep staining.

Entry 2

GEISHA Id	SLC30A5.Robb.2012	Data Source	Publication
Complete cDNA Template Probe	show GCCTGTGCCCTGGGCGTGCGCGTCGGTGCGCGGCCTGGCCTGGGTCTGCCTTGGCGTCGGCTGAGGATGAGGGGTCCCT GGGGCGGGGGAGGCCGCCGCTGAGCGCGCGCCCGGCCGCGGGCCTCTTCCCGCGCGCCCCTTCCTTCGCCGCGGCATGG AGGAAAAGTACAGCAGCCAGGCCCTGGCCGGCGGCGGCGTGCTGGGGCCCGTGGATGTGCCCAGCGCCCGGTTAACTCG GTATATTGTGCTGCTGTGCTTCGCCAAGTTTCTGAAGGCGGTGGGCCTCTTTGAATCCTACGATCTCCTGAAAGCAGTC CATCTTGTGCAGTTTATTTTCATAGTGAAGCTGGGGTCTGCATTTTTTATGGTCTTATTTCAAAAACCATTTTCTTCTG GAAAAGTGGTAACCAAGCATCAGTGGATCAAAATTTTTAAGCATGCTGTTGTGGGATGTATCATTTCACTCTTATGGTT TTTTGGCCTAACTCTTTGTGGACCACTGAGAACACTGTTGCTGTTTGAACACAGTGATGTGGTTGTGCTGTCACTCCTT AGTGTCTTGTTCACAAGCTCAGGTGGAGGACCAGCCAAGACAAGAGGTGCTGCATTTTTCATCATCGCTGTCATCTGCC TTCTGCTTTTTGATAATGATGACCTCATGGCTAAAATAGCAGAACATCCTGAGGGACATCATGACAGTGCTCTTACACA TGTTCTGTATACAGTCATTGCTTTCCTGGGTGTTGCAGATCACAAGGGAGGAGTGCTGCTTCTGGTACTGGCACTGTGT TGCAAAGTTGGTTTTCACATGGCTTCTCGAAAGCTTTCTGTCGATGTAGGTGGAGCCAAACGTCTTCAAGCTTTATCTC ATCTTGTTTCTGTGCTTCTGTTGTGCCCGTGGGTCATTGTCCTCTCTCTGACAACAGAGAGCAAAGTTGAGTCTTGGTC TTCTCTCATCATGCCTTTCATAACAGTGATATTTTTTGTTGTGATTTTGGATTTCTATGTGGAGTCCATATGCTCTGTC AAGATGGAATCTTCCAAATGTGCTCGATACGGATCCTTCCTTATATTCATTAGTGCACTGCTTTTTGGCAACTTTTGGA CACATCCAATAACAGACCAGCTTCGAGCTATGAACAAACCAGCCCACCATGAGAGCACAGAACACGTTCTTTCTGGAGG AGTGGTAGTGAGTGCTGTATTCTTCATTTTATCGGCCAATATCCTGTCCTCCCCCTCCAGGAAGGGGCAAAAGGGCACC CTTATTGGCTATTCTCCTGAAGGCACTCCTCTATATAACTTCATGGGTGATGCAATACAGCAGAGTTCTCAGTCATTAC CACGTTTTATTAAAGAGTCATTGAAACAGATTCTTGAGGAGTATGATTCTAGGCAGATCTTCTATTTCTTGTGCCTAAA TCTGGCTTTCACTTTTGTGGAGCTTTTTTATGGAGTATGGACCAATAGCCTTGGTCTTATATCTGATGGATTTCACATG CTTTTTGATTGTTCTGCATTAGTGATGGGGCTTTTTGCAGCTCTGATGACAAGATGGAAAGCAACTCGCATATTTTCCT ATGGATACGGACGTGTAGAAATTCTCTCTGGTTTTATTAATGGCCTCTTTTTGATGGTAATCGCTTTCTTTGTTTTCAT GGAGTCAGTGGCCAGACTGGTAGACCCTCCAGACATAGACACAAATATGCTAACTCCAGTCTCTGTTGGAGGGTTGATT GTAAACCTGGTTGGTATCTGTGCCTTTAGCCACGCACACTCCCACGGGGCTTCTCGTGGAGGCTGTCATTCACATGAGC ACAGCCATTCTTACCATGGACACAGCCACAGCCATGGGCATGGCCATTCCCACAATGACCATGGGCACAGCCACGGACA TTCCCATGTGTCCTCAGGAGGAGGCATGAATACCAACATGAGAGGTGTGTTTCTGCACGTGTTAGCAGACACTCTTGGC AGCGTGGGTGTTATAGTGTCTACCACGTTTATTCAGCAATTCGGATGGCTGATAGCTGATCCCCTCTGCTCTCTTTTTA TTGCTACGTTGATTTTTCTCAGTGTTATCCCACTACTGAAAGATGCCTGTCAAGTGCTTTTGTTGAGGATACCTCCAGA ACAGGAGAAAGATCTGCATGCTGCTTTAGAAAAGATTCAGAAAATAGATGGAGTCATATCCTACAGAGATCCTCATTTT TGGTGTCATTCTGCAAGTGTTGTGGCAGGTACGATACATGTGCAAGTGGTATCAGATGTGATGGAGCAGAGAATTGTAC AGCAGGTTACAGCAATTCTGAAAGATGCTGGAGTAAATAACCTAACTGTCCAAGTGGAGAAGGAAGCTTATTTTCAACA CATGTCTGGCCTCAGTACAGGATTTCAGGATGTACTTGCAATGACTCAACATCTAGAATCCATGAAATATTACAAAGAT GGGACTTATATAATGTGACAAAAAATATTTTAGCCAAAGGGTAGATGGTAAATCTGTAGGATTCCATGTCTGTATTATT TTTGTCTGGGGATATTGCACATACATGTACAGAAAAAAAATGTACTATAGTCTTGATTTTTTTAAGCACTGTATCTGTA TTGAGATTGAGTCAAGATGCTTTTGTAAAGAAAATAAGGACTATAATATTTGCTGTATATGTGAAAATAATGGAAATCC TAAGTACTGTACATTGTGTGGTGTTAATTAAACAGAAATCTTACCACTGGTGGATGAACAAAAAAAAAAAAAAA
Citation	Robb EA, Antin PB, Delany ME. Defining the Sequence Elements and Candidate Genes for the Coloboma Mutation. PLoS One. 2013; 8(4): e60267.
Copyright	This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_001031419.2