Geisha

home

|

contact

A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

Quick Search

Data Class

Enter Text:

Gene Family QuickSearch

	Transcription Factors
	Growth Factors
	Receptors
	MicroRNAs

Human Disease Gene Search

	Downloads
	Protocols
	About GEISHA
	Contact Us

	Transgenic Birds
	Model Organism Databases
	Gene Expression Databases
	Genomic Resources
	Anatomical Atlases
	Chicken Stage Series

BRD3
bromodomain containing 3

Gene

Official Symbol	BRD3
Official Full Name	bromodomain containing 3
BirdBase ID	BB-GG1080
CGNC ID	1932
also known as	bromodomain-containing protein 3, Bromodomain-containing protein 3, RING3-like protein
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_425330
Polypeptide	XP_425330
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.9809

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly	31722			FBgn0004656
Human	8019	ENSG00000169925		MIM:601541
Mouse	67382	ENSMUSG00000026918	All phenotypic alleles (4):Targeted, knock-out(1) Targeted, other(2) Gene trapped(1)	MGI:1914632
Xenopus	733891, 100036838			492564
Zebrafish	327108, 327372	ENSDARG00000006527	ZDB-GENE-030131-5316, ZDB-GENE-030131-6141	ZFIN:ZDB-GENE-030131-5316, ZFIN:ZDB-GENE-030131-6141

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	427757
Ensembl Gene	ENSGALG00000002682
KEGG	gga:427757

Entry 1

GEISHA Id	ChEST983j4	Data Source	GEISHA ISH Analysis
Forward cDNA Template Probe	show CAAGAAGAGCAACTGGAGGGACTATAAGGCAAACGTTGCTGGAGCTGCCGGGGCAAAGTTGCATGGTTGGACCCTGGAA ATGGGATGTCAGTCCCATTCAGGGAGCATAAAGGAAGAAGGAGAATCTCCCAGTTGCTGCTGCTGTGACAGCGAGTGAG AGCACGAGCAGGAAGATGTCGACAGTCACTTCAGCAATTCAGGCTCCTCAGGGCCCTGTGAATCCACCACCTCCGGAGG TCACTAATCCTAATAAGCCTGGCCGGAAGACCAACCAATTGCAATATATGCAAAATGTTGTTGTAAAGACCTTATGGAA GCATCAGTTTGCTTGGCCTTTCTACCAACCTGTTGATGCAATTAAATTGAATTTACCGGATTATCACAAAATAATAAAA AACCCCATGGACATGGGGACTATCAAGAAACGCCTGGAACATAACTATTACTGGAGTGCCAGTGAATGTATGCAGGATT TCAACACCATGTTTACAAATTGTTATATTTATAACAAGCCCACAGATGACATCGTCCTTATGGCCCAAGCCCTTGAGAA GATATTTCTGCAGAAGGTTGCTCAGATGCCTCAGGAGGAAGTCGAATTATTACCCCCAGTTCCTAAAGGCAAAGGTCGT AAGCCGTCAGTGGGCACACAGAGTGCAGGAACACAGCAAGCAGTGGCCGTGTCTTCCGTCTCCCCGCCGGCCCCGTTCC AGAGCGTCCCTCCAGCCGTGTCTCAGACGCCCGTCATCGCTGCCACCCCTGTGCCAACCATCACTGCTAATGTCCCACC TGTCACTGGCCCCACTGCCGCTGCTCCCCCTCCGCCTGCTGCTCCGATA
Comments	no specific expression detected stages 6-17.

no images

Entry 2

GEISHA Id	BRD3.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	5'-CGATAATGCCTGTGGTTCCTCCTAC-3'
Reverse cDNA Template Primer	5'-AATTAACCCTCACTAAAGGTGGGTTTGCTTCGGTGGTTG-3'	cDNA Template Length	919
Complete cDNA Template Probe	show CGATAATGCCTGTGGTTCCTCCTACGCCGCCAGTAGTCAAGAAAAAGGGAGTGAAGCGGAAAGCAGACACGACCACCCC CACCACCTCCGTGATAACTGCCAGCCGGAGCGAGTCCCCCACGCCCCTCTCAGACCCCAAACAGGCCAAAATCATCGCT CGGCGTGAGAGCGGCGGCCGGCCCATCAAACCACCAAAGAAAGACCTTGAGGACGGAGAGGTCCCCCAGCATGCAGGGA AGAAGGGCAAACTGTCTGAGCACCTCAAGTACTGTGACAGCATTCTCAAGGAGATGCTTTCGAAGAAGCATGCAGCCTA TGCATGGCCCTTTTACAAGCCCGTTGATGCAGAGGCCTTGGAATTACATGACTATCATGATATTATCAAACACCCCATG GATCTCAGTACTGTTAAAAAAAAGATGGACAGTCGGGAATACCAGGACGCACAAGGTTTTGCAGCAGATATTCGGTTAA TGTTCTCTAATTGTTACAAGTACAATCCTCCAGACCACGAAGTGGTAGCCATGGCCAGGAAGCTACAGGATGTCTTTGA GATGAGGTTTGCAAAGATGCCTGATGAGCCTGCAGAGGCCCCTCCTCCTCCTCCTCCAACAGCACCAGTTGTGAGCAAA AGCACAGAGAGCAGTCACAGCAGTGAGGAGAGCTCTTCTGACTCAGACAGCTCAGACTCGGAAGAAGAGCGAGCAACTC GGCTGGCAGAGCTCCAGGAGCAGCTAAAGGCAGTCCATGAGCAGCTAGCTGCGTTATCACAAGCACCAGTGAACAAACC AAAGAAAAAAAAAGAGAAGAAGGAAAAAGAGAAGAAAAAGAAAGACAAAGAGAAGGAAAAGGAAAAGCACAAAGTAAAA GCTGAGGAGGAGAAGAAGCCTAAGGTGGCTCAACCACCGAAGCAAACCCA

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

4-6

stage 4

7-12

stage 7

stage 10

stage 10

Amnion
Blood Islands
Endoderm
Extraembryonic Mesoderm
Forebrain
Head Mesenchyme
Heart Tube
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Paraxial Mesoderm
Sinus Venosus
Somites
Splanchnic Mesoderm

precardiac region

13-18

stage 13

Amnion
Blood Islands
Eye
Forebrain
Foregut
Head Mesenchyme
Heart Tube
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Sinus Venosus
Somites

19-23

stage 19

stage 19

stage 19

stage 19

stage 22

stage 23

stage 23

stage 23

Allantois
Ear/Otic Placode
Eye
Forebrain
Foregut
Gut
Hindbrain
Leg Mesenchyme
Midbrain
Neural Crest
Neural Plate/Tube
Notochord
Oral Pharynx
Pharyngeal Arches and Clefts
Sclerotome
Sinus Venosus
Somatic Mesoderm
Spinal Cord
Spinal Ganglia and Nerves
Splanchnic Mesoderm
Widespread Expression
Wing Mesenchyme

Data from NCBI Unigene EST Profile
Unigene ID: Gga.9809

Mouse

Emage	MGI:1914632
Eurexpress	MGI:1914632
MGI GXD	MGI:1914632

Frog

Xenbase

Fruit Fly

BDGP	FBgn0004656

Zebra Finch

ZEBrA

Zebrafish

ZFIN	ZDB-GENE-030131-5316, ZDB-GENE-030131-6141

Home

|

Contact

University of Arizona

NICHD

National Institute of Health

Hy-Line

© 2008 Arizona Board of Regents
This website is hosted by the Biotechnology Computing Facility at the University of Arizona