GEISHA - A Chicken Embryo Gene Expression Database
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EDAR
ectodysplasin A receptor

The human orthologue of this gene is associated
with the following human diseases:
Gene
Official SymbolEDAR
Official Full Nameectodysplasin A receptor
CGNC ID12611
also known astumor necrosis factor receptor superfamily member EDAR|ectodysplasin A1 receptor, EDAR
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001012611
PolypeptideNP_001012629
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.22980
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human10913ENSG00000135960MIM:129490MIM:604095
Mouse13608ENSMUSG00000003227All phenotypic alleles (9):Spontaneous(4) Chemically induced(1) Targeted, other(2) Transgenic(2) MGI:1343498
Xenopus448544, 380208945378
Zebrafish796370ZDB-GENE-070117-2062ZFIN:ZDB-GENE-070117-2062
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene428015
Ensembl Gene
KEGGgga:428015

Entry 1

GEISHA IdEDAR.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template Primer5’-AAGAATGTGCAGGGGCTACC-3’
Reverse cDNA Template Primer5’-AATTAACCCTCACTAAAGGGCTGCATGCCATCTGTCATG-3’cDNA Template Length756
Complete cDNA Template Probeshow
AAGAATGTGCAGGGGCTACCTCTGGCATTTCAGCCATTTTCCCGAGCACGTCTGGCACAAGTACTTTCTCACCTTACCA
GCATGCTCACAAAGCAGACCTTTCAGGACAAGGACATCTGGCTACAGCTCTGATAATTGCAATGTCTACCATATTCATA
ATGGCTATTGCCATTGTCCTCATCATCATGTTTTACATTGTGAAAACCAAACCTTCTGCTCAAGCCTGTTGCAAGAGTC
ACTCAGTAAAAAATGTCGAAGCTCAGGCTAATACTCAAGAAGAGAAGAAAGAAGTACAAGATAATGTTGTGATATTCTC
TGAGAAAGAAGAGTTTGAAAAACTTACAGCAACTCCAGCTAAGGCTGCTAAAAGTGAAAACGATGCATCTTCTGAGAAT
GAACGACTTCTAAGTCGTAGCATGGATAGTGATGAAGAAGCTGCAGTTGACAAGCAAGGGACACCAGAGAGATGCTTGT
TATCATTAGTGCATTTGGCCAGAGATAAATCTTCCACAAGCAATAAATCAACTGGGATTCAAAGTCGAAGAAAGAAGAT
ACTTGATGTGTACGCTAACGTGTGCGACGTTGCAGAAGGCCTGAGCCCTACGGAGCTGCCTTTTGACTGTCTGGAGAAG
ACCAGCCGAATGCTCAGTTCAACATACAATACTGAGAAGGCCATAGTGAAAACGTGGCGTCACCTTGCTGAGAGCTTTG
GGCTGAAGAGGGACGAAATTGGTGGCATGACAGATGGCATGCAGC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 5
stage 6
Unlabeled
 
7-12
stage 8
stage 9
stage 11
Head Mesenchyme
Neural Plate/Tube
 
13-18
stage 16
stage 17
Ubiquitous Embryonic
extraembryonic ectoderm
 
19-24
stage 21
stage 24
Eye
Foregut
Head Mesenchyme
Leg Mesenchyme
Lung
Pharyngeal Arches and Clefts
Sclerotome
Wing Mesenchyme
 
25-26
stage 26
Foregut
Head Mesenchyme
Leg Mesenchyme
Mesonephros
Pharyngeal Arches and Clefts
Sclerotome
Ventricles
Wing Mesenchyme
 

Entry 2

GEISHA IdEdar.Drew.2007Data SourcePublication
Complete cDNA Template Probeshow
GTAAAATATCAAGAGAACATGGCTCACCTGGGTGAATGTAAATGGACTCATGTGTTCCCTTTTCTGGTGGTTTCCTTGG
TGTACTCTGCCAGCGCTGAATACTCCAACTGCGGTGAGAACGAATACTACAACCAAACCACTGGCATGTGCCACGACTG
CCCCAAATGTGAGCCGGGTGAAGAGCCGTACATGACATGTGGGTATGGCACCAAAGATGAGGACTATGGCTGCATTCCC
TGCCCATCAGAGAAGTTTTCCAGAGGAGGTTACCAGATATGCAGGAGGCACAAGGACTGCGAGGGATTCTTTCGAGCCA
CTGTCCTGACACCAGGCGATCAAGAGAACGATGCAGAGTGCGGGCCTTGTCTCCCAGGTTACTACATGCTGGAAAACAG
ACCTCGAAACATATACGGAATGGTTTGCTACTCATGCTTGTTGGCACCTCCTAACACCAAAGAATGTGCAGGGGCTACC
TCTGGCATTTCAGCCATTTTCCCGAGCACGTCTGGCACAAGTACTTTCTCACCTTACCAGCATGCTCACAAAGCAGACC
TTTCAGGACAAGGACATCTGGCTACAGCTCTGATAATTGCAATGTCTACCATATTCATAATGGCTATTGCCATTGTCCT
CATCATCATGTTTTACATTGTGAAAACCAAACCTTCTGCTCAAGCCTGTTGCAAGAGTCACTCAGTAAAAAATGTCGAA
GCTCAGGCTAATACTCAAGAAGAGAAGAAAGAAGTACAAGATAATGTTGTGATATTCTCTGAGAAAGAAGAGTTTGAAA
AACTTACAGCAACTCCAGCTAAGGCTGCTAAAAGTGAAAACGATGCATCTTCTGAGAATGAACGACTTCTAAGTCGTAG
CATGGATAGTGATGAAGAAGCTGCAGTTGACAAGCAAGGGACACCAGAGAGATGCTTGTTATCATTAGTGCATTTGGCC
AGAGATAAATCTTCCACAAGCAATAAATCAACTGGGATTCAAAGTCGAAGAAAGAAGATACTTGATGTGTACGCTAACG
TGTGCGACGTTGCAGAAGGCCTGAGCCCTACGGAGCTGCCTTTTGACTGTCTGGAGAAGACCAGCCGAATGCTCAGTTC
AACATACAATACTGAGAAGGCCATAGTGAAAACGTGGCGTCACCTTGCTGAGAGCTTTGGGCTGAAGAGGGACGAAATT
GGTGGCATGACAGATGGCATGCAGCTGTTTGACCGCATCAGCACAGCGGGCTACAGCATCCCGGAACTGCTCACCAAAC
TGGTACAAATCGAGCGGTTGGATGCTGTCGAGTCTCTGTGTGCAGATATTCTGGAGTGGGCACAAGCAATGCCTGCTCC
TGAACCAGCAGTGACGTCCTGA
CitationDrew CF, Lin CM, Jiang TX, Blunt G, Mou C, Chuong CM, Headon DJ. The Edar subfamily in feather placode formation. Dev Biol. 2007 May 1;305(1):232-45. Epub 2007 Feb 16.
CopyrightReprinted with permission from Elsevier. Copyright © 2007 Elsevier B.V. All rights reserved.
CommentsAs information provided is insufficient to verify exact sequence used to synthesize the probe, the sequence below was obtained from NCBI (Acc# NM_001012611.1) [Authors said: cEdar: entire ORF and 43 nt of 5′ and 3′UTRs]
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 28
stage 30
stage 30
Feathers/Scutae
 
31-36
stage 34
stage 36
stage 36
Feathers/Scutae
 

Entry 3

GEISHA IdEDAR.Houghton.2005Data SourcePublication
Complete cDNA Template Probeshow
GTAAAATATCAAGAGAACATGGCTCACCTGGGTGAATGTAAATGGACTCATGTGTTCCCTTTTCTGGTGGTTTCCTTGG
TGTACTCTGCCAGCGCTGAATACTCCAACTGCGGTGAGAACGAATACTACAACCAAACCACTGGCATGTGCCACGACTG
CCCCAAATGTGAGCCGGGTGAAGAGCCGTACATGACATGTGGGTATGGCACCAAAGATGAGGACTATGGCTGCATTCCC
TGCCCATCAGAGAAGTTTTCCAGAGGAGGTTACCAGATATGCAGGAGGCACAAGGACTGCGAGGGATTCTTTCGAGCCA
CTGTCCTGACACCAGGCGATCAAGAGAACGATGCAGAGTGCGGGCCTTGTCTCCCAGGTTACTACATGCTGGAAAACAG
ACCTCGAAACATATACGGAATGGTTTGCTACTCATGCTTGTTGGCACCTCCTAACACCAAAGAATGTGCAGGGGCTACC
TCTGGCATTTCAGCCATTTTCCCGAGCACGTCTGGCACAAGTACTTTCTCACCTTACCAGCATGCTCACAAAGCAGACC
TTTCAGGACAAGGACATCTGGCTACAGCTCTGATAATTGCAATGTCTACCATATTCATAATGGCTATTGCCATTGTCCT
CATCATCATGTTTTACATTGTGAAAACCAAACCTTCTGCTCAAGCCTGTTGCAAGAGTCACTCAGTAAAAAATGTCGAA
GCTCAGGCTAATACTCAAGAAGAGAAGAAAGAAGTACAAGATAATGTTGTGATATTCTCTGAGAAAGAAGAGTTTGAAA
AACTTACAGCAACTCCAGCTAAGGCTGCTAAAAGTGAAAACGATGCATCTTCTGAGAATGAACGACTTCTAAGTCGTAG
CATGGATAGTGATGAAGAAGCTGCAGTTGACAAGCAAGGGACACCAGAGAGATGCTTGTTATCATTAGTGCATTTGGCC
AGAGATAAATCTTCCACAAGCAATAAATCAACTGGGATTCAAAGTCGAAGAAAGAAGATACTTGATGTGTACGCTAACG
TGTGCGACGTTGCAGAAGGCCTGAGCCCTACGGAGCTGCCTTTTGACTGTCTGGAGAAGACCAGCCGAATGCTCAGTTC
AACATACAATACTGAGAAGGCCATAGTGAAAACGTGGCGTCACCTTGCTGAGAGCTTTGGGCTGAAGAGGGACGAAATT
GGTGGCATGACAGATGGCATGCAGCTGTTTGACCGCATCAGCACAGCGGGCTACAGCATCCCGGAACTGCTCACCAAAC
TGGTACAAATCGAGCGGTTGGATGCTGTCGAGTCTCTGTGTGCAGATATTCTGGAGTGGGCACAAGCAATGCCTGCTCC
TGAACCAGCAGTGACGTCCTGA
CitationHoughton L, Lindon C, Morgan BA. The ectodysplasin pathway in feather tract development. Development. 2005 Mar;132(5):863-72. Epub 2005 Jan 26.
Copyrightcopyright is held by the authors. Published by the Company of Biologists Ltd.
CommentsThe probe was amplified by PCR using the following primers: 5′-CTICCIGGITAC/TTAC/TATG-3′ and 5′-C/TTGCATICCA/GTCIGTCAT-3′ and was extracted from NCBI Acc# NM_001012611.1.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-36
stage 31
stage 31
stage 31
stage 31
stage 31
stage 32
stage 32
stage 32
stage 32
stage 32
stage 34
stage 36
stage 36
Feathers/Scutae
Surface Ectoderm
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.22980

Mouse

EmageMGI:1343498
EurexpressMGI:1343498
MGI GXDMGI:1343498

Frog

Xenbase945378

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-070117-2062
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