Geisha

home

contact

Quick Search

Data Class

Enter Text:

Gene Family QuickSearch

SMARCD2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2

Gene

Official Symbol	SMARCD2
Official Full Name	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
CGNC ID	209
also known as	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, 60 kDa BRG-1/Brm-associated factor subunit B, BRG1-associated factor 60B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
gene type	protein-coding

Genomic Map

Sequence Information

Gene Expression

In Situ Hybridization	GEISHA
EST Profile

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	6603	ENSG00000108604		MIM:601736
Mouse	83796	ENSMUSG00000078619	All phenotypic alleles (1):Targeted, knock-out(1)	MGI:1933621
Xenopus	734143, 447634			489102
Zebrafish	564317	ENSDARG00000088877	ZDB-GENE-080215-1	ZFIN:ZDB-GENE-080215-1

Gene Ontology

Links to other databases

GEISHA Id	pgn1c.pk010.h16	Data Source	GEISHA ISH Analysis
Forward cDNA Template Probe	show CAGCGTGGACCCCAATGACCAGAAGAAGACGGCCTGCTACGACATTGACGTGGAGGTGGATGACCCCCTGAAAGCTCAG ATGAGCAACTTCCTGGCTTCCACCACCAACCAGCAGGAGATCGCCTCCCTGGATGCCAAGATCCACGAGACCATCGAAT CCATCAACCAGCTGAAGACACAGCGCGATTTCATGCTGAGCTTCAGCAACAACCCGCAGGATTTCATCCAGGAGTGGAT CAAATCGCAGAGGAGGGACCTCAAGATCATAACAGATGTGATCGGGAACCCTGAGGAGGAGCGGCGAGCTGAGTTCTAC CAACAGCCCTGGGCACAGGAGGCTGTGGGCAGACACATCTTCGCCAAGGTCCAGCAGCGTCGGCAGGAACTGGAACAAG TGCTTGGGATCCGCCTCACTTAAGAGGCCAGCAGGGCTCAGGAGCTCCTTCTCCTCCTCCTCTCCCTGCTGCCTGAGCC TGACGGTACTTCTTACTGGAATCAAATACAGCACTTGCACAAACCCTACGTGCCTGGAGGGATTTGGAGCCGCTCGTAC CCCTGGGCTCCCCTCAGCCAGGAAGCTCTCGCCACAGGCAGAGCAGCAGAGGGTCCCCTGATTCTCCCCGCCCCAAGTC CTGCTGCATTAACATGTCCTTGCTTTTGCGTCGCGCCGTTCACCTCTCCCTCTAGCAATGAATGCAGCCCTCTGCGAGC ACGCTCTCTGTCCCATCCCTCACCCTGCCTCTGGCCAAAGCCCTCCTGGCATTGCTGCCTGCCCTGCCAGCCCTCCCCA CCACCGTGAGGGGCAGCCCCGCCTTGCCCCTCTTCAACCAAGTTTGTCATTCCAATGCCAGCCCTGCTGGTGGCCGATG TTTTGGCCTATTTTGTGACGGGGTTTTATAAAAAAAAAAAAAAGG
Comments	no specific expression between stages 4 and 13

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

19-24

stage 19

stage 20

stage 22

stage 25

GEISHA Id	SMARCD2.23b3	Data Source	GEISHA ISH Analysis
Forward cDNA Template Probe	show CAGCGTGGACCCCAATGACCAGAAGAAGACGGCCTGCTACGACATTGACGTGGAGGTGGATGACCCCCTGAAAGCTCAG ATGAGCAACTTCCTGGCTTCCACCACCAACCAGCAGGAGATCGCCTCCCTGGATGCCAAGATCCACGAGACCATCGAAT CCATCAACCAGCTGAAGACACAGCGCGATTTCATGCTGAGCTTCAGCAACAACCCGCAGGATTTCATCCAGGAGTGGAT CAAATCGCAGAGGAGGGACCTCAAGATCATAACAGATGTGATCGGGAACCCTGAGGAGGAGCGGCGAGCTGAGTTCTAC CAACAGCCCTGGGCACAGGAGGCTGTGGGCAGACACATCTTCGCCAAGGTCCAGCAGCGTCGGCAGGAACTGGAACAAG TGCTTGGGATCCGCCTCACTTAAGAGGCCAGCAGGGCTCAGGAGCTCCTTCTCCTCCTCCTCTCCCTGCTGCCTGAGCC TGACGGTACTTCTTACTGGAATCAAATACAGCACTTGCACAAACCCTACGTGCCTGGAGGGATTTGGAGCCGCTCGTAC CCCTGGGCTCCCCTCAGCCAGGAAGCTCTCGCCACAGGCAGAGCAGCAGAGGGTCCCCTGATTCTCCCCGCCCCAAGTC CTGCTGCATTAACATGTCCTTGCTTTTGCGTCGCGCCGTTCACCTCTCCCTCTAGCAATGAATGCAGCCCTCTGCGAGC ACGCTCTCTGTCCCATCCCTCACCCTGCCTCTGGCCAAGCCCTCCTGGCATTGCTGCCTGCCCTGCCAGCCCTCCCCAC CACGTGAGGGCAGGCCCAGCCCTGCCCCCTCTTCAACAAGTTTGTCATTCAAATGCCACCCTGGCGGTGGCCGATGTTT TTGCACTATTTTGTGAAAGGTTTTTATAAAAAAAAAAAAA
Comments	No specific expression detected stages 5, 8, and 11.