GEISHA - A Chicken Embryo Gene Expression Database
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APIP
APAF1 interacting protein

Gene
Official SymbolAPIP
Official Full NameAPAF1 interacting protein
CGNC ID5921
also known asmethylthioribulose-1-phosphate dehydratase|probable methylthioribulose-1-phosphate dehydratase
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001031547
PolypeptideNP_001026718
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.22458
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly32334FBgn0030518
Human51074ENSG00000149089MIM:612491
Mouse56369ENSMUSG00000010911All phenotypic alleles (2):Targeted, other(2) MGI:1926788
Xenopus548429, 414636978322
Zebrafish447941ENSDARG00000003132ZDB-GENE-040912-128ZFIN:ZDB-GENE-040912-128
Gene Ontology
Molecular Functionmethylthioribulose 1-phosphate dehydratase activity, zinc ion binding
Biological ProcessL-methionine biosynthetic process from S-adenosylmethionine, more...L-methionine salvage from methylthioadenosine, apoptotic process
Cellular Componentcytoplasm
Links to other databases
Entrez Gene428860
Ensembl Gene
KEGGgga:428860
GEISHA IdAPIP.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerAACTGGTGGAGGAATCAGCCTG
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGAAGTCAAATGAAGCAGCGGTAGAGcDNA Template Length948
Forward cDNA Template Probeshow
CATGTTTCTCCCCATACATAAACTCCATGACGTCTGACCAGAACAGCGCAAGAATCTGGGTATTCTTCCATTGCTTTTG
CCATTCTTTCCTTGAGATCCTTCTCTTCTGGTGTATTCTCAATAATGGGAACCACCAGCGTATCATCATAGCGGTAATA
GCCTCCTGAAGAACACTTCTGGATTCCTTTTATCATCTCCTGATGGGTAATAGTGAACTCATTCCCTGGGTAAAGAAGG
GTAGCCATAACAGCAGCCTTGGAATGAGTATGTATCACTGCACCTGCTCCCCTCATAGTGTAGGCATTCATAAAAAGAG
GTGTGCACTGGCTTTTCTTTAGTTTCTTGTGTGCTGGGGGACCACTGATGTCCTGCTCGTTCATGTCACAAACAAACAT
ATCTTCTGGCTGTATTCTTTCCTTCTGGACTCCTGAAGGAGCAATATAGATTTCATTCCCGTGTTTCAGGCTGATTC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
Unlabeled
 
7-12
stage 8
stage 10
Forebrain
Hindbrain
Midbrain
Neural Plate/Tube
Notochord
Sinus Venosus
 
13-18
stage 14
stage 17
stage 17
stage 17
Dermatome
Ear/Otic Placode
Esophagus
Eye
Forebrain
Foregut
Head Mesenchyme
Hindbrain
Leg Mesenchyme
Mesonephros
Midbrain
Myotome
Neural Plate/Tube
Notochord
Pharyngeal Arches and Clefts
Sclerotome
Sinus Venosus
Somatic Mesoderm
Wing Mesenchyme
 
19-24
stage 19
stage 20
Allantois
Foregut
Head Mesenchyme
Leg Mesenchyme
Liver
Mesonephros
Pharyngeal Arches and Clefts
Sclerotome
Wing Mesenchyme
 
25-26
stage 26
stage 26
stage 26
stage 26
Foregut
Head Mesenchyme
Leg Mesenchyme
Liver
Lung
Mesonephros
Pharyngeal Arches and Clefts
Sclerotome
Spinal Cord
Tail
Wing Mesenchyme
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.22458

Mouse

EmageMGI:1926788
EurexpressMGI:1926788
MGI GXDMGI:1926788

Frog

Xenbase978322

Fruit Fly

BDGPFBgn0030518

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-040912-128
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