Geisha

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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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CXCR1
C-X-C motif chemokine receptor 1

Gene

Official Symbol	CXCR1
Official Full Name	C-X-C motif chemokine receptor 1
CGNC ID	15413
also known as	CXCR2, IL8RB, C-X-C chemokine receptor type 2\|G-protein coupled receptor\|chemokine (C-X-C motif) receptor 1\|chemokine (C-X-C motif) receptor 2\|interleukin 8 receptor, beta\|putative C-X-C chemokine receptor type 1, CXCR1
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC

Sequence Information

Genomic
RNA	NM_001031591
Polypeptide	NP_001026762

Gene Expression

In Situ Hybridization

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	3579	ENSG00000180871		MIM:146928
Mouse	12765	ENSMUSG00000026180	All phenotypic alleles (4):Targeted, knock-out(1) Targeted, other(3)	MGI:105303
Xenopus
Zebrafish	796724	ENSDARG00000054975	ZDB-GENE-100414-1	ZFIN:ZDB-GENE-100414-1

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	430652
Ensembl Gene
KEGG	gga:430652

GEISHA Id	CXCR2.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	AGTGGGTTTTTGGCACCGTC
Reverse cDNA Template Primer	ATTAACCCTCACTAAAGGGGGCAGCATTCAGCATCTTTC	cDNA Template Length	954
Forward cDNA Template Probe	show CCATTGGGNACCCCANGCTGATGTTGCCTTCGCGTGCGCAGTGGTGAACCACGTTGCAGCCCACAGTTGACACCCATCT GNTGNTGCCAGGGGGCCAAGCCCACTGCCCAAGGCTGTGTCTTGTGTTAGGATGCTGGGGTGCGTGGGGTGCCAGGACT GCATGCACCGGGTCTTGGGGAGCAGTGGGGCTCAAAGGGTGGTGGAGGTGTTGCCAGAGGTGGAAGTGTAGGAGGTGCG GCCGTAGCGTGCCACAGCATCCTTGCTGATGAAGCCACGCTGTGCCAGGATCTTGAGGAAGCTGTTGCGAAACTTCTGC CCGATGAAGGCGTANATGATGGGGTTGATGCAACTGTGGGCAAAGCCAAGGACCTGCGTGATGGAGAGGGCTGTGTCGA TGTGTTTCCTCCTCTCGCAGGTCTCGGTGATGGCACGCGTCCTCATGAGGGTATCGCTCACCAGCGTGATGTTGTAGGG CAGCCAGCAGACAAGGAAGACCAGCACCACAGCTAGGATGACCTTCATGGCGCGCTGCTTCTGGACGTTCTTGGTCTGC AGGAGGGTGTGCACGGTGACACCATANCANAANAGCATGACCAGGAGGGGCAGGGCAAANCCNAAGGTCTGCGGCANCA CCCGCANCACCACCCTCCACTTGGTGGTATTCTCATTGCCAATGCNCTCGTANCAAACCGTGCCATTGCGGTCTGAAAC AAACNCCTCACGGAACANCANCACGGGCAGGNANANCANCACCNANAACACCCANATGCCCACACANACAAACTTCACC CANTGCCTCTTCTCGGTGGCANCNCGNGTGGCNTANACNATGGCCAANTANCNNTCCACNCTNATNCAANCCAACANCA NGATGCCNCTNTAAAANTTGNATTCCTGCANCACCNAAATGCTTTNCNCNTNACNNTGCCAAAAAACCCANTAA

Stage

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Location (click to highlight)

Comments (click to highlight)

7-12

stage 8

stage 9

Extraembryonic
Extraembryonic Mesoderm
Neural Plate/Tube

very faint expression

13-18

stage 14

stage 15

stage 16

Forebrain
Foregut
Hindbrain
Midbrain
Neural Plate/Tube
Sclerotome
Somites

faint expression

19-24

stage 21

Eye
Forebrain
Foregut
Hindbrain
Midbrain

25

stage 25

stage 25

Eye
Forebrain
Gut
Hindbrain
Midbrain
Pharyngeal Arches and Clefts
Spinal Cord

Mouse

Emage	MGI:105303
MGI GXD	MGI:105303

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN	ZDB-GENE-100414-1

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