GEISHA - A Chicken Embryo Gene Expression Database
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PABPC1
poly(A) binding protein cytoplasmic 1

Gene
Official SymbolPABPC1
Official Full Namepoly(A) binding protein cytoplasmic 1
CGNC ID54111
also known aspolyadenylate-binding protein 1, PABP 1, Poly(A)-binding protein 1, Polyadenylate-binding protein 1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Sequence Information
Genomic
RNANM_001031597
PolypeptideNP_001026768
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human26986ENSG00000070756MIM:604679
Mouse18458ENSMUSG00000022283All phenotypic alleles (3):Targeted, other(3) MGI:1349722
Xenopus448595, 379896, 432140963456
Zebrafish393856, 606498ENSDARG00000021140, ENSDARG00000017219ZDB-GENE-050308-1, ZDB-GENE-030131-3238ZFIN:ZDB-GENE-050308-1, ZFIN:ZDB-GENE-030131-3238
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene430997
Ensembl Gene
KEGGgga:430997
GEISHA IdA47Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
GAGAGAGAGAAAGAGCTATTGAAAAAATGAATGGTATGCTGCTTAATGACCGCAAAGTATTTGTTGGAAGGTTTAAATC
CCGCAAGGAACGTGAGGCAGAGCTTGGAGCCAGAGCAAAGGAATTCACCAATGTTTACATCAAGAATTTTGGAGAAGAC
ATGGATGATGAGAGACTTAAGGAACTCTTTGGCAAGTTTGGTCCTGCCTTAAGTGTGAAAGTTATGACTGATGAGAGTG
GAAAATCCAAGGGCTTTGGCTTCGTTAGTTTTGAAAGACATGAAGATGCCCAAAAGGCTGTAGATGAGATGAATGGAAA
AGAGCTCAACGGGAAACAAATCTATGTTGGACGGGCTCAGAAAAAAGTGGAAAGACAGACGGAGCTGAAGCGTAAATTT
GAGCAAATGAAGCAGGACAGGATCACCAGATACCAGGGTGTAAACCTTTACGTGAAAAATCTCGATGATGGAATTGATG
ATGAACGTCTTCGAAAAGAATTCTCCCCATTCGGTACAATCACCAGTGCAAAGGTCATGATGGAAGGTGGACGCAGCAA
AGGATTTGGGTTTGTCTGCTTTTCGTCACCAGAAGAAGCCACCAAAGCTGTCACAGAGATGAATGGTAGAATTGTGGCT
ACTAAACCACTGTATGTAGCTCTAGCCCAGCGTAAAGAAGAGCGCCAAGCTCATCTCACCAACCAGTATATGCAGAGAA
TGGCGAGGTTGCTAAGCAGCAGTCCTGCTAATCCATGTAATCAACCCCTACCAACCATTGCACCTCCTTCCAGGTTAGC
TTCATGCCAGCTATCCCACAAGAATCAAAACCAGATGCTAGCTGATACGTCTATTTCCTACTAATTCAAAGCATGCACA
CTACTTGCTAGACCGGTAAGTCATCACTGGTACTGCTCATTGGAGATTGACAGACTCTCAACTCCATTCAAAACATGCC
TCGAGTGCTATCCTGCCCAGTCATCTTCGTTCGAAGGTTGATGAAGCTGTAGCCGTACTACAAGCCCACCAAGCTAAAG
AAGCTGCTCAAAAGGCAGTTAATAACCCTACTGGGGTTCCAAGTGTTTAATAAAAAGATCCGGGAACTGCAGTCTAGAA
CTTCGCTTCACCGAAGAAAAAAAAAAAATTTAAACATGGAAAAACTATTAAATATTGAGAAAAACATTGCAAAATATAA
AATGAATAAAAAAAAAAAAAAAAA
CommentsPart of this clone maps to a second gene (ENSGALG00000014450), however single mRNAs from EMBL contain exons from both genes indicating that these two genes may represent splice variants of one or a gene duplication. Widespread expression at stages 9-25.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 6
Germinal Crescent
Neural Plate/Tube
 

Mouse

EmageMGI:1349722
MGI GXDMGI:1349722

Frog

Xenbase963456

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-050308-1, ZDB-GENE-030131-3238
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