GEISHA - A Chicken Embryo Gene Expression Database
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ARHGEF39
rho guanine nucleotide exchange factor 39

Gene
Official SymbolARHGEF39
Official Full Namerho guanine nucleotide exchange factor 39
CGNC ID1869
also known asC9orf100, CZH9ORF100, rho guanine nucleotide exchange factor 39|Rho guanine nucleotide exchange factor (GEF) 39|vav-like protein C9orf100
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNANM_001195689
PolypeptideNP_001182618
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly38806FBgn0035761
Human84904ENSG00000137135
Mouse230098ENSMUSG00000051517MGI:3036286
Xenopus100170508, 3985816257689
Zebrafish492469ENSDARG00000013476ZDB-GENE-041114-28ZFIN:ZDB-GENE-041114-28
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene431661
Ensembl GeneENSGALG00000002599
KEGGgga:431661
GEISHA Idc9orf100.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerGCTCTTGAAACCAACCTGTTAG
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGAACCAAAAGCCAGCCTTCcDNA Template Length801
Forward cDNA Template Probeshow
GGGAGTACAGCGCCCTGGAGTCAACACCCGGGGTCTTCTGTCCTTTGAGGAGTTTCTGAACCCTGTGTAGCTGCAGTGC
AGTTCTCTCTCTTACAAGCAATGTCCTGAACCCATTGAGATACCTCAGAAACGGATTTCACAGCCTTTGCAAGTTTCTG
GTACTCAGCACTGGCTGGGCTGGTGTTCTCCAGCAGGTCTCTGAGGAAATGCTTGTACTGGTGCAACCTCTGCAGAGGC
AAAGGAAGCAAATCCTCTAGCTTTCTCCCTTGAAACTGAGGTCGAGTTTCTTGGAGCTTCTTAAAACGTCGGAATGATT
TATTTTTCCTCAATTGTTCCATCAAGGTTTTATTTGCCTGTTCAAAATTCTCAGCATAGTGACCATAAAGCTCCAATTT
CTGACAGAAATTCTCCAGTCCTAGTCCTAAATTGCCCCTCTCCAGGTGAAGCGACAGAACTTGGCTGGCAGAATATATG
GATTCCAGGGGTCCAAATATGGTTTCCATTACGGCAGGTTTCAGTGTCCCTTTGGCCTTTAAAATTGTCACAAAGAACG
TCACCACCAAATCCAGCTGCTCGAGGTATCTGTGCTCCGTTTCCAGCAGCTCCTTGGCTGTGCGGCTGCGCTTTCTCTC
CCAGCGAGCCCTCTGCTCTTCCACTGTGTTTGCTCCAGCCATGGGTGCAGGGGGTGAGTAGCTCATGGCAGCCTCAGGG
CCTTGGTGTTTCTCTTGGTATCTTGATATTCCTCTGAAGTCTTAACAGCCTAACAGGTTG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
stage 5
stage 6
Area Pellucida
Extraembryonic Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
 
7-12
stage 7
stage 9
stage 10
Blood Islands
Extraembryonic Mesoderm
Head Mesenchyme
Headfold
Heart Tube
Lateral Plate Mesoderm
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
Somites
 
13-18
stage 13
stage 16
stage 17
Blood Islands
Ear/Otic Placode
Endoderm
Eye
Head Mesenchyme
Heart
Intermediate Mesoderm
Lateral Plate Mesoderm
Limb Buds
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Pharyngeal Arches and Clefts
Somatic Mesoderm
Somites
Spinal Cord
Tail
Widespread Expression
 
19-24
stage 22
stage 22
Anterior Intestinal Portal
Anterior/Second Heart Field
Ear/Otic Placode
Endoderm
Eye
Heart
Limb Buds
Lung
Neural Plate/Tube
Notochord
Pharyngeal Arches and Clefts
Somites
Trapping in ear
25
stage 25
  

Mouse

EmageMGI:3036286
MGI GXDMGI:3036286

Frog

Xenbase6257689

Fruit Fly

BDGPFBgn0035761

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-041114-28
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