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A chicken embryo gene expression database

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	Gene Name
	GEISHA ID
	Multiple Parameters

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SMOC1
SPARC related modular calcium binding 1

The human orthologue of this gene is associated
with the following human disease:

Microphthalmia with limb anomalies

Gene

Official Symbol	SMOC1
Official Full Name	SPARC related modular calcium binding 1
BirdBase ID	BB-GG17833
CGNC ID	7159
also known as	SPARC-related modular calcium-binding protein 1
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_001231760
Polypeptide	XP_001231761
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	64093	ENSG00000198732	MIM:206920	MIM:608488
Mouse	64075	ENSMUSG00000021136	All phenotypic alleles (3):Transposon induced(1) Targeted, other(2)	MGI:1929878
Xenopus	100145733, 100233223			989093
Zebrafish	100529120		ZDB-GENE-110310-7	ZFIN:ZDB-GENE-110310-7

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	768688
Ensembl Gene
KEGG	gga:768688

GEISHA Id	SMOC1.Alev.2010	Data Source	Publication
Complete cDNA Template Probe	show ATGGCCGCCTTGCTCGCGGCCTTCCCTGTCTTGGCAGTGCCTCCTGCCGCAGCCAAGGGCTCTTTTTTAATAAGCGACC GTGACAGAGACCCTCAGTGTAACCTGCATTGCTCCAGGTCCCAGTCCAAACCACTCTGTGCCTCTGATGGCAGAACGTA TGAGTCCATGTGTGACTACCAGCGAGCCAAGTGCCGGGAGTCAAGCCTGAGTGTGACACATCGTGGCCGGTGCAAAGAT GCTGGCCAAAGCAAGTGTCGATTAGAGAGAGCTCAAGCACTGGAACAGGCAAAGAAGCCCCAGGAAGCAGTCTTCATCC CAGAATGCAATGAGGATGGGTCATTCACGCAGGTACAGTGCCATACCTACACTGGATACTGCTGGTGTGTGACACCTGA TGGCAAGCCTATTAGCGGCTCTTCTGTACAGAACAAAACTCCTGTATGTTCAGGTTCTGTAACTGATAAACCGTCAAGC CAGGGTAACTCAGGGAGGAAAGATGATGGGTCGAAGCCGACGCCGACCATGGAAACCCAGCCTATTTTTGACGGAGAAG AAATCACAGCACCCACCCTGTGGATTAAGCACTTAGTCATCAAAGATTCCAAACTGAACAGCTCCAGTATAAGGAATTC AGAGAAAGTTCACTCCTGCGACCAGGAAAGACAGAGCGCGCTGGAGGAGGCCAGGCAGAACCCCCGCGAGGGTATCGTC ATCCCCGAGTGCGCTCCGGGAGGGCTCTACAAACCAGTGCAATGCCACCAGTCCACCGGATACTGCTGGTGCGTCCTGG TGGACACCGGCCGCCCTCTGCCCGGTACTTCCACTCGCTATGAGACTCCAGTGTGTGAAAGTGATGCCAGGTCGAAGAG TACAGAGATTGATGATCCATTCAAGGACAGAGAACTTCCAGGCTGCCCAGATGGGAAGAAAGTTGAATTTATCACCAGC TTACTCGATGCTCTCACTACGGACATGGTACAGGCTATTAACTCAGCAGCACCTACTGGGGGTGGGAGGTTCTCTGAGC CAGACCCCAGCCACACGCTGGAGGAGCGAGTGGTACACTGGTACTTCAGCCAGTTGGACAATAACAGCAGCAATGACAT CAATAAGCGAGAGCTGAAGCCTTTCAAGCGCTATGTGAAGAAGAAAGCCAAGCCCAAGAAATGTGCCCGACGTTTCACT GACTACTGTGACCTCAACAAGGACAAGTCTATCTCCCTTCAGGAGCTGAAAGGGTGCTTGGGAGTCAGCAAGGAAGGAG GTAGCCTGAGCAGTTTCCCCAGTGGAAAAAGACAAGGCCTTAACCCTTTCATAGGCCGCTTGGTGTAGCAGCAGCAGAA GACAGAAGGGAAGGCAGGAGCCGACCCAAAGGAAGGAAAGATACAGCGACAGATGGACACCTTGCTTCTTATGAGCAAG CATGCAGCATCAGCAACATCCAATGTAGCAGAGGTGGCACCCAGAACGTTTGCACTTTCTAATAATTGGTTTGGGTTTG TTTTTAATTTCTTTTCAATGCCATTATCTAATACTTTGGAGAGCGGGGGGAAACAGGATCATGACTTTTTAAAATTGGA ACAGCTACTGATGACTTAAAATTGAGTTCACTGGGACTCGAAGAAAGAGAATTTTATATACTGTATATAAATATGTATG TAAATTGTACAGTTGTCTTGTACAGGGGTTGGAGTCACTGTTCTGTTCCTCCCTTTGCTTTTGAAGGCTGTTAGGGTTA GAGGGACACTTTGCCTTTAATGGATTACAGTAATGCTTTCATTTCTGCCATCTGATCCATCATTCAGTTGCAAACCGAT CTCTTACCGTCCCCACGCATGAAGGAGTAAGCATATCAGCATGACCTGTGCACACAGTGCCCCACATACTAAATGCTTC TTGAGAACCCCCTCTTTGATTACTGTGCAGCTCTGTGCAAGTCACAGGCGTCAGGACTTCTGAGAGAGCATGGAGTTGT GCACTGCAAAGCTCCTCAGAGTAGGGATTGGAAAGGGTTGTATTAAGGAAATGTAGAAATAGTTTCTGCACTCGTTGCA GAATGGTTAGAAATGAATTGCAAATGCATTGCTATTCAGGCTCAGAAGACATGCTTAGCAAAGATGTGCCATGTCCTGG GAATCTAATGCTATTGGAAGGGCATGGAAACCATAGACCCTGGTAGAATCAGCAGAGTGATGTCATGCATCTTCTTCTC TGACACAGTGTTCATCTATATAAGCAATAGAAATACTGAGGAATCAGCAAAAGGCAGCATCAGACTGCCTGTTACTTTG CTGAAGAGCAAAGAGCGAATTTGTCAGTGCAGAAAGACACGATCATGCTGCTGGTTCCCAAGAGTCTGCTTTTACTTGT GCTTCAACTCTGCAGCTTGGGCCATGCTTCTGGTAAAGGATTGCCTGCAACGACTGATCTTATCTTTGGTGGCTCCTCT CCTGCACAGGGGACAGCCTGTCTAGCTTTGATTACCTACTTCTCCTGATTCTCTGGTATCAGTATCTCTTGTGCTTTTG TACTTTAGTGGCACATTTCAGTAACAGCAAAGGCTTGGATTGAAGGGCTTGGTGCTCCTGGAGGACAAGAGCTGTTTCA AACACCTGCAGTTTTCCCAAACTTGTTGCTTACTTAACTTCAGTCAGATGCAGCTGTAAAGTCAGCAGATCTGCTATCC TGGGCTTGGACAGAGTGCGATGGGACACGCTGTGCTTTGCTTTGTGCATTTTCAGTCTCCAGCAGCACTTGCCCATTCC TAGAG
Citation	Alev C, Wu Y, Kasukawa T, Jakt LM, Ueda HR, Sheng G. Transcriptomic landscape of the primitive streak. Development. 2010 Sep 1;137(17):2863-74. Epub 2010 Jul 28.
Copyright	Published by The Company of Biologists 2010. This material is protected by a copyright retained by the authors. Permission granted by Dr. G Sheng.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #XM_001231760.2).