GEISHA - A Chicken Embryo Gene Expression Database
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CCBE1
collagen and calcium binding EGF domains 1

The human orthologue of this gene is associated
with the following human disease:
Gene
Official SymbolCCBE1
Official Full Namecollagen and calcium binding EGF domains 1
CGNC ID1880
also known ascollagen and calcium-binding EGF domain-containing protein 1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
Gallus-Browse
Sequence Information
Genomic
RNAXM_001233357
PolypeptideXP_001233358
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.26460
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human147372ENSG00000183287MIM:235510MIM:612753
Mouse320924ENSMUSG00000046318All phenotypic alleles (1):Targeted, knock-out(1) MGI:2445053
Xenopus100495021920171
Zebrafish555629ENSDARG00000060022ZDB-GENE-090506-7ZFIN:ZDB-GENE-090506-7
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene770043
Ensembl Gene
KEGGgga:770043
GEISHA IdCCBE1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template Primer5'-AGGAGAGAGTGTTTGGACGGAG-3'
Reverse cDNA Template Primer5'-AATTAACCCTCACTAAAGGGAGTGCCATTTAGGTTGCTCG-3'cDNA Template Length1180
Complete cDNA Template Probeshow
AGGAGAGAGTGTTTGGACGGAGGACTCATTCATCAACAGAGGAGTTTCCATTACCTCAGGAATTTACAAACTATCATGA
CACGGTAGATTTTGGATCTGGAGAGGACTACAAACCACGCGCAGCACCCAGAGACTCCAGGATACAGAAGGCAGCCCAT
CCTTAGCTATGCCTACTGAAAAATAGAGCCCTTCTAGAGTTCTTTGTTATAAAAATGCACTGACAATGTAAAATATATA
GAGATTATTTCCTATCTTTCTCTTTGCTTTTCCCTAACCATGCTGCCTGTACTGTAGCTTTCCCAGTTCATGATGGCCT
CCTCGCAGTAATTCTATACCTTCAAGCCTGCACTGTGCATTGTATGTAGTTTAACAGGAAAACCTTCTTAATGTATAGG
GCTAGCATGAATCAGGCAAGAGCTAGATAATGGGGCAGACAACAGCATCTCATCTGCCTACCTGTGGTTCTGTGTCCAA
ATGACCCAGTACCTAAATTTTGTGAGGGGTAGAGAGGTGAGAGAGGTAGCTGAACATCATCCCCAAAAGACATCAGTAA
TGAAAGCCTAGGTTCACATTTACTTTATACATGTAAATGAATTATTCCACTAAACACAAGTCTCCAGCTAGTGTCCCCA
AGCTTAGGAGAGTGTGAAAAGTGGATCTCTGTTTCACAGCAGAGGCCAGTTCAATGTGAGGAGTCTCCTTCTGTTATGC
TTCACCACGACAGAAAAAGAAAATATGATGAAGCAGTGATGCTTGTTGATCAAGAAATTATGTGGCTTGCTGTTAATAG
AGAATTGTACAAAGACAGTCAAGAAGACGTCTTAGTCCTAAACTAACAATTCTTTTCCCTTACCATTCTTTCACTGCTC
AGTGTGAAGCAGAGTTCTCTTTCTCAGCGGGGTCATACTGGATACATTTTCACACAGATGAGCAAGAGAACAGGGATAA
AGCAGGAAAAGCAAGCATATGTCAATCAAGTTGGCTTATTGGCAAGCACAAATATTTCAACCTTGCAGAAAGTCAAGAT
TCTGACCTCCTGCAGGTGCTTTGTCTTCCTTGATGAAATGCTAACAATTTTACTTGATCCAAGTAAAACTGAGACCAGA
GAGAGTCCTCGTTTGCAAAGAGCTTCCATCTGTTTTGCTCCTCTTACTGCATGCGAGCAACCTAAATGGCACTC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 9
Unlabeled
 
13-18
stage 13
stage 13
stage 18
stage 18
Dermatome
Foregut
Head Mesenchyme
Lateral Plate Mesoderm
Midbrain
Myotome
Neural Plate/Tube
Pharyngeal Arches and Clefts
Sclerotome
Sinus Venosus
Somatic Mesoderm
 
19-24
stage 20
stage 20
Forebrain
Foregut
Head Mesenchyme
Hindbrain
Leg Mesenchyme
Liver
Lung
Midbrain
Neural Plate/Tube
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Spinal Ganglia and Nerves
Wing Mesenchyme
 
25-26
stage 26
Forebrain
Foregut
Head Mesenchyme
Hindbrain
Leg Mesenchyme
Liver
Mesonephros
Midbrain
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Spinal Cord
Spinal Ganglia and Nerves
Wing Mesenchyme
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.26460

Mouse

Emage
EurexpressMGI:2445053
MGI GXDMGI:2445053

Frog

Xenbase920171

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-090506-7
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