GEISHA - A Chicken Embryo Gene Expression Database
Browse By
- Anatomical Location
- Stage
- Gene Name
- GEISHA ID
- Multiple Parameters
Search
- Quick Search
Data Class
Enter Text:
go
- Gene Family QuickSearch
Transcription Factors
Growth Factors
Receptors
MicroRNAs
- Human Disease Gene Search
Documents
- Downloads
- Protocols
- About GEISHA
- Contact Us
Resources
- Transgenic Birds
- Model Organism Databases
- Gene Expression Databases
- Genomic Resources
- Anatomical Atlases
- Chicken Stage Series
_

ANGPTL1
angiopoietin like 1

Gene
Official SymbolANGPTL1
Official Full Nameangiopoietin like 1
CGNC ID3154
also known asangiopoietin-related protein 1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001277665
PolypeptideNP_001264594
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.55721
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human9068ENSG00000116194MIM:603874
Mouse72713ENSMUSG00000033544All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(2) MGI:1919963
Xenopus100170184482122
Zebrafish544656, 334311ENSDARG00000012071ZDB-GENE-040724-269, ZDB-GENE-030131-6243ZFIN:ZDB-GENE-040724-269, ZFIN:ZDB-GENE-030131-6243
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene770850
Ensembl Gene
KEGGgga:770850

Entry 1

GEISHA IdANGPTL1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerCCTTGGGTATGCTGTTGTTCCTAC
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGGTGTCCTGCCGTGAGAAGATTCcDNA Template Length601
Forward cDNA Template Probeshow
AGCACTGCTCTTCAGCAGGGGAGATGGATCACAGACTGGATTATTTACAAGGGTCAGTCAGGTGCTGCATATTTTACTT
CAAGCTCCCTTGTATTTTGTTGCCATCTTCAACATTTCTGTTGTTACATTGAGGACTTTATTTTCCAGTTGGGAAAGTT
CAAGTGAGTTATCGCGCTTTCGGATTATCTCATGCAAGAGTTGCATATAGAGTTGAGTGACCCGAGAGTTCATGTTACG
GCTTTCTTTCCTCAGCAACTTTACTTCATTCACAATGTTTCCATCCACGTCTACCACCAACTGCAAGATGTCAATCTCA
CGTTTTTGCTTGGACAGCACATCCTTCAAGTTCTCTATGTCCATTCTTGTGACTTCATCTTTTCTGTTACCAGTACCTG
GTTCGTTATTCACACAGATTGGCCCTGTGATTTTTTGTTCTGGGACCAAGAAGGTGTAACCACATTTCCTCCCTTCCTC
TCCACCATCTGTGGAACGAGGATGTCTCCGTTGGGATGTTTTGTTGAGGGTCGATGGTTCTGTACAGCGCCCGATAGAC
AACAGTAGGAACAACAGCATAACCC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 7
stage 10
stage 11
stage 11
Neural Plate/Tube
Somites
Unlabeled
 
13-18
stage 15
stage 15
stage 15
stage 16
Dermomyotome
Neural Plate/Tube
Sclerotome
Somatic Mesoderm
trapping
19-24
stage 21
stage 21
stage 21
stage 23
Ear/Otic Placode
Foregut
Head Mesenchyme
Lateral Plate Mesoderm
Leg Mesenchyme
Pharyngeal Arches and Clefts
Sclerotome
Wing Mesenchyme
trachea
25
stage 25
stage 25
stage 25
stage 25
stage 25
Ear/Otic Placode
Foregut
Lateral Plate Mesoderm
Leg Mesenchyme
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Wing Mesenchyme
trachea

Entry 2

GEISHA IdANGPTL1.Niki.2009Data SourcePublication
Complete cDNA Template Probeshow
GGAATCTGGGTCAGCTGTGGCTGCTTAGTGCACTTCTGCATGGGAGAGTACAACGCCACAGCTTCAAAAAAACAAAAAC
ATTGCTCCCTCCCCTCCCTCTGGAGTAAAACATACTGAAACTTTTTCTTCAGTTGTATTTAAATGATTTAAATAGGTTG
GTTATCGCATGGAGAAACCCAACTCCCCAGCGCAGCCTGGATCTAACAGAGAAAGACAAAAGCAGTTTTCAACTCCAAC
TGCAGCTTAACAATCTACAACATCAGGAAACACAGAAAGAAAAGGCAACTTGGCCTCCGGATCCACCAACTACGACAGA
AGCAAACCAGCTGCAACATTCCTTCTTCTTGTCTCTTCTAAGTTCTCACACTTCCTTCAAAATGAAGATACTGAAATGG
ACCTTGGGTATGCTGTTGTTCCTACTGTTGTCTATCGGGCGCTGTACAGAACCATCGACCCTCAACAAAACATCCCAAC
GGAGACATCCTCGTTCCACAGATGGTGGAGAGGAAGGGAGGAAATGTGGTTACACCTTCTTGGTCCCAGAACAAAAAAT
CACAGGGCCAATCTGTGTGAATAACGAACCAGGTACTGGTAACAGAAAAGATGAAGTCACAAGAATGGACATAGAGAAC
TTGAAGGATGTGCTGTCCAAGCAAAAACGTGAGATTGACATCTTGCAGTTGGTGGTAGACGTGGATGGAAACATTGTGA
ATGAAGTAAAGTTGCTGAGGAAAGAAAGCCGTAACATGAACTCTCGGGTCACTCAACTCTATATGCAACTCTTGCATGA
GATAATCCGAAAGCGCGATAACTCACTTGAACTTTCCCAACTGGAAAATAAAGTCCTCAATGTAACAACAGAAATGTTG
AAGATGGCAACAAAATACAAGGAGCTTGAAGTAAAATATGCAGCACTGACTGACCTTGTAAATAATCAGTCTGTGATCA
TCTCCCTGCTGGAAGAGCAGTGCTTGAGAATCTTCTCACGGCAGGACACCCATGGGTCCCCGCCGCTTGTCCAAGTGGT
GCCGCAGCACATTCCCAACAGTCAGCCTTATACTCCCGTTCTCCTGGGAGGCAATGAGATACAGAGAGACCCAGGGTAC
CCCAGAGACAGGGATGTAAGGCCACCACCTGACCCAGCTACTTCTCCTACGAAGAGTCCCTTCAGAGTTCCACCACTGG
CGTTAATTAACGAAGGTCCGTTCAAAGACTGCCAACACGCCAAAGACGCTGGGTATTCCAACAGTGGGATTTATATGAT
CAAAGCCGAAAACAGCAATGAACCAATGCAGCTATGGTGTGAGAACAGCTTAGACCCCGGAGGATGGGCAGTTATTCAG
AAGAGAACAGATGGATCTGTCAACTTTTTCAGGAACTGGGACAGTTACAAGAAAGGATTTGGAAACATTGATGGAGAGT
ACTGGCTGGGACTAGAAAATATTTACATGCTTACCAATCAGGATAATTACAGACTACTGATTGAATTAGAGGACTGGAG
CAACAAGAAAGTCTATGCAGAATACAGCAGTTTCCGTCTGGAGCCCGAAAATGAATTCTACAGGCTACGCTTAGGAACA
TACCAAGGAAACGCAGGCGATTCCATGATATGGCACAACGGAAAGCAATTTACAACACTGGACAGAGACAGAGATATGT
ATTCAGGAAACTGTGCTCATTTCCACAAAGGGGGCTGGTGGTACAACGCGTGCGCACACTCCAATCTGAACGGGGTGTG
GTACAGAGGAGGCCACTACAGGAGCAAGTACCAGGATGGAATATTTTGGGCTGAGTACCGGGGAGGTTCCTACTCCTTG
AAAGCAGTTCAAATGATGATCAGACCTATAGACTGAGGAGGAAAAGTCCGCAGTGCTCAAGCCAGCAAGCATAAACTTA
CTGGTGCTTGAGTTACAGAAAAATAAAATGTTACTTTCAAATCATTATTTTGCACAATCTGTCCCTGCAAAATGCAGGT
CTTCTATTTTCCTTTCTTCCCAGTTGCCCCTTGCCTTTTTTTTTTTTTTTAATTAAAGGAACCTTTTCTACTGTAACAG
TGTTTTGTAAACACACATTCAA
CitationNiki D, Katsu K, Yokouchi Y., Ontogeny of angiopoietin-like protein 1, 2, 3, 4, 5, and 7 genes during chick embryonic development. Dev Growth Differ. 2009 Dec;51(9):821-32.
CopyrightCopyright © 1999–2012 John Wiley & Sons, Inc. All Rights Reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # XM_001233149.2)
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
Unlabeled
 
13-18
stage 14
stage 18
  
19-23
stage 23
stage 23
stage 23
stage 23
stage 23
stage 23
Dermomyotome
Leg Mesenchyme
Sclerotome
Somites
Wing Mesenchyme
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.55721

Mouse

EmageMGI:1919963
EurexpressMGI:1919963
MGI GXDMGI:1919963

Frog

Xenbase482122

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-040724-269, ZDB-GENE-030131-6243
Home | Contact
     
© 2008 Arizona Board of Regents
This website is hosted by the Biotechnology Computing Facility at the University of Arizona