GEISHA - A Chicken Embryo Gene Expression Database
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HOXA10
homeobox A10

Gene
Official SymbolHOXA10
Official Full Namehomeobox A10
CGNC ID16063
also known ashomeobox protein Hox-A10
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
Gallus-Browse
Sequence Information
Genomic
RNAXM_001235692
PolypeptideXP_001235693
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST Profile
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human3206ENSG00000253293MIM:142957
Mouse15395ENSMUSG00000000938All phenotypic alleles (3):Targeted, knock-out(3) MGI:96171
Xenopus378640478887
Zebrafish30391ENSDARG00000031337ZDB-GENE-990415-97, ZDB-GENEP-000823-10ZFIN:ZDB-GENE-990415-97, ZFIN:ZDB-GENEP-000823-10
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene776143
Ensembl GeneENSGALG00000026631
KEGGgga:776143

Entry 1

GEISHA IdHOXA10.Hughes.2011Data SourcePublication
Complete cDNA Template Probeshow
AAAACACAGGGAGAGCCGCGGCTTTATTAATTTCGTGACACACACACGGGCTGCTCGGGGAGGTGAGCACGCATCGCTT
CCGGAGAGCCCGACCGCGGGGAGAGAGGAGCGATAATAAAAGCTTCATCTGGCCGCGGCCGCAGCCGGGGTGTCATAAA
CACCGCCGCGCCGAGCGGTGCGTGGGGCAGAGCGGAGGGAGCCGGGAGCCGCCGCCTGCCCCGCTCCGGCCCTGCCCCG
CCGCGCCGCTCCGCACGTGTGCGTGTGGCTGGAAATCCATATCGCGCATTAATATCCATCCATATCCCAAATTCAGAGG
TCGACCTGAGAGCAGCTCGGTGCATACGAAACCAGACGGGGAGGGGTTGCTGGGGAGGCCCGGGCTTCCATTGGCTGCA
AGCGTTCGCCGCGGTGCGGGGGTATCTCTAATCATATTCAGCATGTTTTGCACAAGAAATGTCAGCCAGGAAGGGCTAT
CCGCTCCCTTCGCCAAATTATTCCACGACAATGTCATGCTCCGAGAGCCCGGCTGCAAACTCTTTCCTGGTGGACTCGT
TGATCAGCGCGGGCAGAGGGGACGCGGCGGCAGCGGGAGGCGGAGGCGGAGGAGGAGGCGGCTACTACCCGGGCAGCGG
GCTCTACCTGCCACAGGCGTCCGAGCTGTCCTACGGGCTGCAGGGCTGCGGACTGTTCCCCGTCCTGGGCAAACGCAAT
GAAGGTACTTCGCAAAGCATGGTCCCCAGCACGCACCCCTACGTGTCGGGGATGGAAGTGTGGCTAGACCCGCCCCGCT
CCTGTCGCATGGAAGAGCCGGAGAGCCAGCAGGCCACCTCGTGCTCCTTCGCTCAAAACATTAAGGAGGAGAGCTCCTA
CTGCCTCTATGACTCAGAGAAGTGCCCCAAGGGCTCGGCCGCCGCCGACCTCGCTCCCTTCCCGCGGCTGAGCGCCGAG
GTCAGCCCCTCCGCCAACGGCACCGGGGTGCCGGTCCCGGGCTACTTCCGCCTCTCCCAGGCTTACGGCACCTCCAAGG
GCTACGGCGCGGGGCCGGCCGGGACGGCCCCCTTCGCTCCGCAGCCCCCCGGCCGCTTCCAGCCGCCGCCGTCGGGGCC
GCCCGTGCCGGAGGCGGGCAGGAGGGAGGACGAGGAGCGCTCCCCCAGCCCCTCGGCGTGCGGCTCCCAGCGGGAGGAC
GAGACCCGCGCTTCGTCGTCCACCGCCGAGGAGCTCTCCCCCGCGCCGTCGGAGGGCAGCAAGGCCTCTCCCGAGAAGG
AGCCCGTAGGCAATTCAAAAGGAGAAAATGCAGCAAACTGGCTAACCGCAAAAAGTGGCCGAAAGAAACGGTGCCCCTA
TACCAAGCATCAAACTCTCGAGCTGGAAAAGGAGTTTCTGTTCAATATGTACCTGACTCGTGAGCGTCGCCTAGAGATC
AGCCGCACAGTCCACCTCACAGACAGACAAGTTAAAATCTGGTTTCAGAACCGCAGAATGAAACTGAAGAAAATGAACA
GAGAGAATAGGATTCGGGAGCTCACAGCCAACTTTAATTTCTCTTGA
CitationHughes MW, Wu P, Jiang TX, Lin SJ, Dong CY, Li A, Hsieh FJ, Widelitz RB, Chuong CM. In search of the Golden Fleece: unraveling principles of morphogenesis by studying the integrative biology of skin appendages Integr Biol (Camb). 2011 Apr;3(4):388-407. Epub 2011 Mar 24.
Copyright© Royal Society of Chemistry 2011
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # XM_001235692.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-29
stage 26
stage 26
stage 29
Dermis
Surface Ectoderm
epithelium
mesenchyme

Entry 2

GEISHA IdHOXA10.Alvarez.2003Data SourcePublication
Complete cDNA Template Probeshow
TTTATTAATTTCGTGACACACACACGGGCTGCTCGGGGAGGTGAGCACGCATCGCTTCCGGAGAGCCCGACCGCGGGGA
GAGAGGAGCGATAATAAAAGCTTCATCTGGCCGCGGCCGCAGCCGGGGTGTCATAAACACCGCCGCGCCGAGCGGTGCG
TGGGGCAGAGCGGAGGGAGCCGGGAGCCGCCGCCTGCCCCGCTCCGGCCCTGCCCCGCCGCGCCGCTCCGCACGTGTGC
GTGTGGCTGGAAATCCATATCGCGCATTAATATCCATCCATATCCCAAATTCAGAGGTCGACCTGAGAGCAGCTCGGTG
CATACGAAACCAGACGGGGAGGGGTTGCTGGGGAGGCCCGGGCTTCCATTGGCTGCAAGCGTTCGCCGCGGTGCGGGGG
TATCTCTAATCATATTCAGCATGTTTTGCACAAGAAATGTCAGCCAGGAAGGGCTATCCGCTCCCTTCGCCAAATTATT
CCACGACAATGTCATGCTCCGAGAGCCCGGCTGCAAACTCTTTCCTGGTGGACTCGTTGATCAGCGCGGGCAGAGGGGA
CGCGGCGGCAGCGGGAGGCGGAGGCGGAGGAGGAGGCGGCTACTACCCGGGCAGCGGGCTCTACCTGCCACAGGCGTCC
GAGCTGTCCTACGGGCTGCAGGGCTGCGGACTGTTCCCCGTCCTGGGCAAACGCAATGAAGGTACTTCGCAAAGCATGG
TCCCCAGCACGCACCCCTACGTGTCGGGGATGGAAGTGTGGCTAGACCCGCCCCGCTCCTGTCGCATGGAAGAGCCGGA
GAGCCAGCAGGCCACCTCGTGCTCCTTCGCTCAAAACATTAAGGAGGAGAGCTCCTACTGCCTCTATGACTCAGAGAAG
TGCCCCAAGGGCTCGGCCGCCGCCGACCTCGCTCCCTTCCCGCGGCTGAGCGCCGAGGTCAGCCCCTCCGCCAACGGCA
CCGGGGTGCCGGTCCCGGGCTACTTCCGCCTCTCCCAGGCTTACGGCACCTCCAAGGGCTACGGCGCGGGGCCGGCCGG
GACGGCCCCCTTCGCTCCGCAGCCCCCCGGCCGCTTCCAGCCGCCGCCGTCGGGGCCGCCCGTGCCGGAGGCGGGCAGG
AGGGAGGACGAGGAGCGCTCCCCCAGCCCCTCGGCGTGCGGCTCCCAGCGGGAGGACGAGACCCGCGCTTCGTCGTCCA
CCGCCGAGGAGCTCTCCCCCGCGCCGTCGGAGGGCAGCAAGGCCTCTCCCGAGAAGGAGCCCGTAGGCAATTCAAAAGG
AGAAAATGCAGCAAACTGGCTAACCGCAAAAAGTGGCCGAAAGAAACGGTGCCCCTATACCAAGCATCAAACTCTCGAG
CTGGAAAAGGAGTTTCTGTTCAATATGTACCTGACTCGTGAGCGTCGCCTAGAGATCAGCCGCACAGTCCACCTCACAG
ACAGACAAGTTAAAATCTGGTTTCAGAACCGCAGAATGAAACTGAAGAAAATGAACAGAGAGAATAGGATTCGGGAGCT
CACAGCCAACTTTAATTTCTCTTGATGAACCTATAAACACATCTTGATGGTTTAAAGAGCCAGTATCATTTTCCTAGGC
TGTAGTCATCCGCACCTGTACGGATTAACGATTTTAGACGTTCTCAGTATGTCCTTAAACTCTTAATAGCTGCTTCGGG
GCTGCGGGGGGAGCGGAAGAGAGCCACGCTAACGCTGAGGGCCATGTGTGAGCCTCCTCGGTTCCTGCAGCCTTTCCCG
GGCCCGCTTCGCTCTTTCAAGCTTTGAAAACCCAGAAATAGGATTTCAGGAGCCGCAAATATTCCATCCATCCCTCCCC
CCCCCCCCTTTCCCTCCCCCGTGTCTCTCCGAAAAGTAAACGAGCTCGGTTAAAGGCGCATTCTTCTAAAATATAGGCG
GTGTAACTCGGACTGTGAGCAGCTTCGGAATGAATCATTTAAGCCGTGCCATACTTCTATATATTGGGAGCTCAGCTTT
TTCCCCCCCTCTGTTTTCCTTGTCTCCCCCCTCCCCCTTTATCCTTCCCGAAGCAGGACTCGCAATAATGAAATGCAGG
CATCCTTTAAAAGGGCTTCATGGGAACCGGTGTTAAGAGCCATTTTTTTGTTCTTTACCTTGAAAGTCAATATGACGGC
TTTGAAATTGGCCAGGAAAATGAAATCTCTTCTCTTTAAAGATATATATATATATATATATATATATATATATATATAT
ATATATATGTATTCGTCTCGCTCATGGACTAAATGATGACACTTACCTCTGAATTTCTCTCTCTCTTTCTGGTTGTAGA
TATTTACGTAACGTAGTTTTGCTTAAAGATGTGGAATTAGTGATTTTTTTGTTGTTGTTGGTCGATTAATAGCGTTACC
GTTGGTAACACGGGATAAGCACACAACGGTTCCCCCTTGAGAAAAAAAAAAACAATAAAAGGCCGTCACTTTTTCCTCA
CTAATTTCACTGAAAAGTGTACATCCTGAACATCAAAAGGACTTTCTGAGCCAGAGCCTGAGATAGCGAGGGAGGGTTT
GTCCGTCTTCCTTTATACTGTGAAGTTACGTGCATCAAAGGGTGAAACGTATAGGTGAAAAAGAGTAGACAGAGATTTT
AAAAAGAAGAAAGAAAGAAGGGGAAAAGCTATAAATACAGATATGTATAAATGTCTATTATTATTAAAACGCCGATACC
GTTTTAAGCAAATGCATTCTATCGTTATTATAAATGTTAGTTCTAGCTATATCTAGTTCTTACCTTAAATCGGAATAAA
TTAATACTGTAATGCTGCTGTGCGTGAAAAAGACGATGTTTATGTTCTCATAGAAGAATAAAAGACGTGGAATGAA
CitationAlvares LE, Schubert FR, Thorpe C, Mootoosamy RC, Cheng L, Parkyn G, Lumsden A, Dietrich S. Intrinsic, Hox-dependent cues determine the fate of skeletal muscle precursors. Dev Cell. 2003 Sep;5(3):379-90.
CopyrightCopyright © 2012 Elsevier B.V. All rights reserved.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI XM_001235692.3
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
stage 18
stage 18
Lateral Plate Mesoderm
Somites
 

Entry 3

GEISHA IdHoxa-10.Nelson.1996Data SourcePublication
Complete cDNA Template Probeshow
ATGTCAGCCAGGAAGGGCTATCCGCTCCCTTCGCCAAATTATTCCACGACAATGTCATGCTCCGAGAGCCCGGCTGCAA
ACTCTTTCCTGGTGGACTCGTTGATCAGCGCGGGCAGAGGGGACGCGGCGGCAGCGGGAGGCGGAGGCGGAGGAGGAGG
CGGCTACTACCCGGGCAGCGGGCTCTACCTGCCACAGGCGTCCGAGCTGTCCTACGGGCTGCAGGGCTGCGGACTGTTC
CCCGTCCTGGGCAAACGCAATGAAGGTACTTCGCAAAGCATGGTCCCCAGCACGCACCCCTACGTGTCGGGGATGGAAG
TGTGGCTAGACCCGCCCCGCTCCTGTCGCATGGAAGAGCCGGAGAGCCAGCAGGCCACCTCGTGCTCCTTCGCTCAAAA
CATTAAGGAGGAGAGCTCCTACTGCCTCTATGACTCAGAGAAGTGCCCCAAGGGCTCGGCCGCCGCCGACCTCGCTCCC
TTCCCGCGGCTGAGCGCCGAGGTCAGCCCCTCCGCCAACGGCACCGGGGTGCCGGTCCCGGGCTACTTCCGCCTCTCCC
AGGCTTACGGCACCTCCAAGGGCTACGGCGCGGGGCCGGCCGGGACGGCCCCCTTCGCTCCGCAGCCCCCCGGCCGCTT
CCAGCCGCCGCCGTCGGGGCCGCCCGTGCCGGAGGCGGGCAGGAGGGAGGACGAGGAGCGCTCCCCCAGCCCCTCGGCG
TGCGGCTCCCAGCGGGAGGACGAGACCCGCGCTTCGTCGTCCACCGCCGAGGAGCTCTCCCCCGCGCCGTCGGAGGGCA
GCAAGGCCTCTCCCGAGAAGGAGCCCGTAGGCAATTCAAAAGGAGAAAATGCAGCAAACTGGCTAACCGCAAAAAGTGG
CCGAAAGAAACGGTGCCCCTATACCAAGCATCAAACTCTCGAGCTGGAAAAGGAGTTTCTGTTCAATATGTACCTGACT
CGTGAGCGTCGCCTAGAGATCAGCCGCACAGTCCACCTCACAGACAGACAAGTTAAAATCTGGTTTCAGAACCGCAGAA
TGAAACTGAAGAAAATGAACAGAGAGAATAGGATTCGGGAGCTCACAGCCAACTTTAATTTCTCTTGA
CitationNelson CE, Morgan BA, Burke AC, Laufer E, DiMambro E, Murtaugh LC, Gonzales E, Tessarollo L, Parada LF, Tabin C. Analysis of Hox gene expression in the chick limb bud. Development. 1996 May;122(5):1449-66.
CopyrightCopyright © 1996 by Company of Biologists
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_001305645).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 19
stage 19
stage 23
stage 23
Leg
Wing
 
25-30
stage 25
stage 25
stage 28
stage 28
Leg
Wing
 
31-44
stage 44
  

Mouse

EmageMGI:96171
EurexpressMGI:96171
MGI GXDMGI:96171

Frog

Xenbase478887

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-990415-97, ZDB-GENEP-000823-10
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