| name |  |
| | description |  |
| | ensembl id |  |
| | |
| | | ENSGALG00000019198 | gga-let-7c, gga-miR-99a |  |
| | | ENSGALG00000014237 | PPARalpha.Hojo.2006 |  |
| | | ENSGALG00000016570 | L37 |  |
| | | ENSGALG00000014484 | A47 |  |
| 1433E_CHICK | 14-3-3 protein epsilon (14-3-3E). [Source:Uniprot/SWISSPROT;Acc:Q5ZMT0] | ENSGALG00000002661 | G34 |  |
| AES | Amino-terminal enhancer of split (Amino enhancer of split) (GRG protein) (Protein ESP1) (Gp130-associated protein GAM). Source: Uniprot/SWISSPROT Q08117 | ENSGALG00000003240 | Grg5.Van Hateren.2005 |  |
| AL1A2_CHICK | Retinal dehydrogenase 2 (EC 1.2.1.36) (RalDH2) (RALDH 2) (RALDH(II)) (Retinaldehyde-specific dehydrogenase type 2) (Aldehyde dehydrogenase family 1 member A2). [Source:Uniprot/SWISSPROT;Acc:O93344] | ENSGALG00000004270 | ChEST564A12, Raldh2.Bothe.2006, Raldh2.Cui.2003, Raldh2.Reijntjes.2004, Y11 |  |
| ANKRD6 | Ankyrin repeat domain-containing protein 6. [Source:Uniprot/SWISSPROT;Acc:Q9Y2G4] | ENSGALG00000015768 | ChEST689f10 |  |
| APOA1_CHICK | Apolipoprotein A-I precursor (Apo-AI) (ApoA-I). [Source:Uniprot/SWISSPROT;Acc:P08250] | ENSGALG00000007114 | APOA1.Bertocchini.2008, G39, O39, R49 |  |
| ASB1 | Ankyrin repeat and SOCS box protein 1 (ASB-1). [Source:Uniprot/SWISSPROT;Acc:Q9Y576] | ENSGALG00000004272 | ChEST192c20 |  |
| BIR_CHICK | Inhibitor of apoptosis protein (IAP) (Inhibitor of T-cell apoptosis protein). [Source:Uniprot/SWISSPROT;Acc:Q90660] | ENSGALG00000017186 | ChEST1034o19 |  |
| BMP2_CHICK | Bone morphogenetic protein 2 precursor (BMP-2) (Fragment). [Source:Uniprot/SWISSPROT;Acc:Q90751] | ENSGALG00000008830 | Bmp2, BMP2.Allen.2001, Bmp2.Andree.1998, Bmp2.Bardot.2004, Bmp2.Bonafede.2006, BMP2.Chapman.2002, Bmp2.Chapman.2008, Bmp2.Christ.2002, Bmp2.Ghatpande.2006, Bmp2.Holleville.2007, Bmp2.Huillard.2004, Bmp2.Kamimura.2004, Bmp2.Klewer.2006, BMP2.Kruithof.2006, Bmp2.Lincoln.2004, Bmp2.Maden.2007, BMP2.McKinnell.2004, BMP2.Michon.2007, Bmp2.Nissim.2006, BMP2.Sakiyama.2000, Bmp2.Schlueter.2006, BMP2.Yamada.2000 |  |
| BMP4_CHICK | Bone morphogenetic protein 4 precursor (BMP-4). [Source:Uniprot/SWISSPROT;Acc:Q90752] | ENSGALG00000012429 | Bmp4.Ashique.2002, Bmp4.Bardot.2004, Bmp4.Bastida.2004, Bmp4.Bonafede.2006, BMP4.Chapman.2002, Bmp4.Chapman.2005, Bmp4.Chapman.2008, Bmp4.Christ.2002, Bmp4.Holleville.2007, BMP4.Honig.2005, Bmp4.Huillard.2004, Bmp4.Jensen.2005, BMP4.Jin.2001, BMP4.Joubin.1999, Bmp4.Kamimura.2004, BMP4.Kruithof.2006, BMP4.McKinnell.2004, BMP4.McPherson.2000, BMP4.Nielsen.2001, Bmp4.Nissim.2006, BMP4.Ohta.2007, Bmp4.Peters.2002, BMP4.Sakiyama.2000, Bmp4.Sanchez-Calderon.2005, Bmp4.Sanchez-Calderon.2007, Bmp4.Schlueter.2006, Bmp4.Shigetani.2000, BMP4.Streit.1998, BMP4.Streit.1999, BMP4.Zhang.2001, ChEST895j20 |  |
| BRAC_CHICK | Brachyury protein (T protein). [Source:Uniprot/SWISSPROT;Acc:P79777] | ENSGALG00000011489 | Brachyury, Brachyury.Hardy.2008, Brachyury.Jaffredo.2005, Brachyury.Mikawa.2004 |  |
| BTRC | F-box/WD repeat protein 1A (F-box and WD repeats protein beta-TrCP) (E3RSIkappaB) (pIkappaBalpha-E3 receptor subunit). [Source:Uniprot/SWISSPROT;Acc:Q9Y297] | ENSGALG00000007820 | BTRC.Agarwala.2005, BTRC.Aglyamova.2007 |  |
| C13orf8 | Zinc finger protein KIAA1802. [Source:Uniprot/SWISSPROT;Acc:Q96JM3] | ENSGALG00000016813 | ChEST663a9, pgn1c.pk011.b12 |  |
| C14orf101 | Uncharacterized protein C14orf101. [Source:Uniprot/SWISSPROT;Acc:Q9NX78] | ENSGALG00000012118 | ChEST732l19 |  |
| CATD_CHICK | Cathepsin D precursor (EC 3.4.23.5) [Contains: Cathepsin D light chain; Cathepsin D heavy chain]. [Source:Uniprot/SWISSPROT;Acc:Q05744] | ENSGALG00000006613 | CathepsinD.Zuzarte-Luis.2007 |  |
| CDK9_CHICK | Cell division protein kinase 9 (EC 2.7.11.22) (EC 2.7.11.23) (Cyclin- dependent kinase 9). [Source:Uniprot/SWISSPROT;Acc:Q5ZKN1] | ENSGALG00000005045 | ChEST1019n6 |  |
| CFC1_CHICK | Cryptic protein precursor (Cripto-related factor 1). [Source:Uniprot/SWISSPROT;Acc:Q9I8Q3] | ENSGALG00000012623 | CFC1.Ishii.2007, Cfc.Schlueter.2006 |  |
| CHGB | Secretogranin-1 precursor (Secretogranin I) (SgI) (Chromogranin B) (CgB) [Contains: GAWK peptide; CCB peptide]. [Source:Uniprot/SWISSPROT;Acc:P05060] | ENSGALG00000009155 | ChEST963k7 |  |
| CLIC4 | Chloride intracellular channel protein 4 (Intracellular chloride ion channel protein p64H1). [Source:Uniprot/SWISSPROT;Acc:Q9Y696] | ENSGALG00000001262 | pgp1n.pk003.h4 |  |
| CNN3 | Calponin-3 (Calponin, acidic isoform). [Source:Uniprot/SWISSPROT;Acc:Q15417] | ENSGALG00000005597 | Y40 |  |
| CO9A1_CHICK | Collagen alpha-1(IX) chain precursor. [Source:Uniprot/SWISSPROT;Acc:P12106] | ENSGALG00000015970 | ChEST859o21 |  |
| COL5A2 | Collagen alpha-2(V) chain precursor. [Source:Uniprot/SWISSPROT;Acc:P05997] | ENSGALG00000002509 | ChEST861l17 |  |
| CPSF4 | Cleavage and polyadenylation specificity factor subunit 4 (Cleavage and polyadenylation specificity factor 30 kDa subunit) (CPSF 30 kDa subunit) (NS1 effector domain-binding protein 1) (Neb-1) (No arches homolog). [Source:Uniprot/SWISSPROT;Acc:O95639] | ENSGALG00000004714 | ChEST71b19 |  |
| CTSC | Dipeptidyl-peptidase 1 precursor (EC 3.4.14.1) (Dipeptidyl-peptidase I) (DPP-I) (DPPI) (Cathepsin C) (Cathepsin J) (Dipeptidyl transferase) [Contains: Dipeptidyl-peptidase 1 exclusion domain chain (Dipeptidyl- peptidase I exclusion domain chain); Dipeptid [Source:Uniprot/SWISSPROT;Acc:P53634] | ENSGALG00000017239 | I10, I11, Q01 |  |
| DHR11_CHICK | Dehydrogenase/reductase SDR family member 11 precursor (EC 1.-.-.-). [Source:Uniprot/SWISSPROT;Acc:Q71R50] | ENSGALG00000005403 | B43 |  |
| DZIP1 | Zinc finger protein DZIP1 (Zinc finger protein DZIP1). [Source:Uniprot/SWISSPROT;Acc:Q86YF9] | ENSGALG00000016895 | DZIP1.Agarwala.2005, DZIP.Aglyamova.2007 |  |
| EFNA5_CHICK | Ephrin-A5 precursor (EPH-related receptor tyrosine kinase ligand 7) (LERK-7) (RAGS protein). [Source:Uniprot/SWISSPROT;Acc:P52804] | ENSGALG00000000280 | EphrinA5.Baker.2003, Ephrin-A5.Marin.2001, ephrin-A5.Mühleisen.2006 |  |
| EMX1 | Homeobox protein EMX1 (Empty spiracles homolog 1) (Empty spiracles- like protein 1). [Source:Uniprot/SWISSPROT;Acc:Q04741] | ENSGALG00000016095 | EMX1.Bell.2001, Emx1.von Frowein.2006 |  |
| EMX2 | Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty spiracles- like protein 2). [Source:Uniprot/SWISSPROT;Acc:Q04743] | ENSGALG00000009302 | EMX2.Bell.2001, Emx2.von Frowein.2006 |  |
| EN1 | Homeobox protein engrailed-1 (Hu-En-1). [Source:Uniprot/SWISSPROT;Acc:Q05925] | ENSGALG00000012120 | EN1.Agarwala.2005, En1.Ahmed.2006, EN1.Bothe.2007, en-1.Ha.2003, En-1.Prin.2004 |  |
| EPHA3_CHICK | Ephrin type-A receptor 3 precursor (EC 2.7.10.1) (Tyrosine-protein kinase receptor ETK1) (CEK4). [Source:Uniprot/SWISSPROT;Acc:P29318] | ENSGALG00000015403 | EphA3, EphA3.Baker.2003, EphA3.Mühleisen.2006 |  |
| EPHA4_CHICK | Ephrin type-A receptor 4 precursor (EC 2.7.10.1) (Tyrosine-protein kinase receptor CEK8). [Source:Uniprot/SWISSPROT;Acc:Q07496] | ENSGALG00000005256 | EphA4, EphA4.Baker.2003, EphA4.Bothe.2006, EphA4.Marin.2001, EphA4.Mühleisen.2006, EphA4.Stockdale.2000 |  |
| ETS1B_CHICK | Transforming protein p68/c-ets-1. [Source:Uniprot/SWISSPROT;Acc:P15062] | ENSGALG00000001143 | ChEST996d15, ETS-1.Bollerot.2005, Ets-1.Tahtakran.2003 |  |
| EVX1 | Homeobox even-skipped homolog protein 1 (EVX-1). [Source:Uniprot/SWISSPROT;Acc:P49640] | ENSGALG00000011077 | EVX1.Agarwala.2005 |  |
| FGD5 | FYVE, RhoGEF and PH domain-containing protein 5 (Zinc finger FYVE domain-containing protein 23). [Source:Uniprot/SWISSPROT;Acc:Q6ZNL6] | ENSGALG00000008546 | ChEST114g22 |  |
| FGF8_CHICK | Fibroblast growth factor 8 precursor (FGF-8) (HBGF-8). [Source:Uniprot/SWISSPROT;Acc:Q90722] | ENSGALG00000007706 | Fgf8, FGF8.Aglyamova.2007, Fgf8.Badde.2005, Fgf8.Chapman.2002, Fgf8.Chapman.2008, Fgf8.Christ.2002, Fgf8.Edom-Vovard.2002, Fgf8.Firnberg.2002, FGF8.Gimeno.2007, Fgf8.Goodnough.2007, Fgf8.Ha.2003, FGF8.Hurtado.2006, Fgf8.Karabagli.2002, Fgf8.Karabagli.2002b, FGF8.Kruithof.2006, Fgf8.Maden.2007, Fgf8.Mikawa.2004, Fgf8.Narita.2005, Fgf8.Sanchez-Calderon.2007, FGF8.Shigetani.2000, FGF8.Streit.1999, FGF8.Streit.2000, FGF8.Vieira.2005, Fgf8.von Frowein.2006, FGF8.Wilm.2004, FGF8.Wu.2006 |  |
| FGFR1_CHICK | Basic fibroblast growth factor receptor 1 precursor (EC 2.7.10.1) (FGFR-1) (Tyrosine kinase receptor CEK1). [Source:Uniprot/SWISSPROT;Acc:P21804] | ENSGALG00000003311 | Fgfr1.Firnberg.2002, FgfR1.Holleville.2007, Fgfr1.Lunn.2007, Fgfr1.Shin.2005, Fgfr1.Shin.2006, FGFR1.Yoshioka.2005 |  |
| FGFR2_CHICK | Fibroblast growth factor receptor 2 precursor (EC 2.7.10.1) (FGFR-2) (Tyrosine kinase receptor CEK3). [Source:Uniprot/SWISSPROT;Acc:P18461] | ENSGALG00000009495 | ChEST827a6, Fgfr2.Firnberg.2002, Fgfr2.Lunn.2007, FGFR2.McCabe.2006, Fgfr2.Shin.2005, Fgfr2.Shin.2006, FGFR2.Yoshioka.2005 |  |
| FGFR3_CHICK | Fibroblast growth factor receptor 3 precursor (EC 2.7.10.1) (FGFR-3) (Tyrosine kinase receptor CEK2). [Source:Uniprot/SWISSPROT;Acc:P18460] | ENSGALG00000015708 | Fgfr3.Lunn.2007, Fgfr3.Shin.2005, FGFR3.Yoshioka.2005 |  |
| FHL2 | Four and a half LIM domains protein 2 (FHL-2) (Skeletal muscle LIM- protein 3) (SLIM 3) (LIM domain protein DRAL). [Source:Uniprot/SWISSPROT;Acc:Q14192] | ENSGALG00000016797 | ChEST54p17 |  |
| FLRT3 | Leucine-rich repeat transmembrane protein FLRT3 precursor (Fibronectin-like domain-containing leucine-rich transmembrane protein 3). [Source:Uniprot/SWISSPROT;Acc:Q9NZU0] | ENSGALG00000008716 | Flrt3.Smith.2006, I38 |  |
| GATA3_CHICK | GATA-binding factor 3 (GATA-3) (Transcription factor NF-E1C). [Source:Uniprot/SWISSPROT;Acc:P23825] | ENSGALG00000006726 | Gata3.Bothe.2006, Gata-3.Jaffredo.2005, Gata3.Sheng.1999 |  |
| Gdf11 | Growth/differentiation factor 11 Precursor (GDF-11)(Bone morphogenetic protein 11) | ENSMUSG00000025352 | GDF11.Gamer.2001 |  |
| GDF8_CHICK | Growth/differentiation factor 8 precursor (GDF-8) (Myostatin). [Source:Uniprot/SWISSPROT;Acc:O42220] | ENSGALG00000023961 | Myostatin.Amthor.2002 |  |
| gga-let-7f | gga-let-7f [Source:miRBase;Acc:MI0001233] | ENSGALG00000018265 | gga-let-7f |  |
| gga-let-7i | gga-let-7i [Source:miRBase;Acc:MI0001168] | ENSGALG00000018237 | gga-let-7i |  |
| gga-let-7j | gga-let-7j [Source:miRBase;Acc:MI0001262] | ENSGALG00000018307 | gga-let-7j |  |
| gga-mir-100 | gga-mir-100 [Source:miRBase;Acc:MI0001258] | ENSGALG00000018303 | gga-miR-100 |  |
| gga-mir-10b | gga-mir-10b [Source:miRBase;Acc:MI0001216] | ENSGALG00000018331 | gga-miR-10b |  |
| gga-mir-125b | gga-mir-125b [Source:miRBase;Acc:MI0001175] | ENSGALG00000018244 | gga-miR-125b |  |
| gga-mir-126 | gga-mir-126 [Source:miRBase;Acc:MI0001244] | ENSGALG00000018276 | gga-miR-126 |  |
| gga-mir-128-1 | gga-mir-128-1 [Source:miRBase;Acc:MI0001217] | ENSGALG00000018332 | gga-miR-128a |  |
| gga-mir-128-2 | gga-mir-128-2 [Source:miRBase;Acc:MI0001192] | ENSGALG00000018284 | gga-miR-128a |  |
| gga-mir-130a | gga-mir-130a [Source:miRBase;Acc:MI0001241] | ENSGALG00000018273 | gga-miR-130a |  |
| gga-mir-130b | gga-mir-130b [Source:miRBase;Acc:MI0001239] | ENSGALG00000018271 | gga-miR-130b |  |
| gga-mir-133b | gga-mir-133b [Source:miRBase;Acc:MI0001206] | ENSGALG00000018321 | gga-miR-133b |  |
| gga-mir-135a-1 | gga-mir-135a-1 [Source:miRBase;Acc:MI0001231] | ENSGALG00000018263 | gga-miR-135a |  |
| gga-mir-135a-2 | gga-mir-135a-2 [Source:miRBase;Acc:MI0001169] | ENSGALG00000018238 | gga-miR-135a |  |
| gga-mir-135a-3 | gga-mir-135a-3 [Source:miRBase;Acc:MI0001264] | ENSGALG00000018309 | gga-miR-135a |  |
| gga-mir-140 | gga-mir-140 [Source:miRBase;Acc:MI0001229] | ENSGALG00000018261 | gga-miR-140 |  |
| gga-mir-142 | gga-mir-142 [Source:miRBase;Acc:MI0001281] | ENSGALG00000018344 | gga-miR-142-3p, gga-miR-142-5p |  |
| gga-mir-153 | gga-mir-153 [Source:miRBase;Acc:MI0001188] | ENSGALG00000021727 | gga-miR-153 |  |
| gga-mir-155 | gga-mir-155 [Source:miRBase;Acc:MI0001176] | ENSGALG00000018245 | gga-miR-155 |  |
| gga-mir-15a | gga-mir-15a [Source:miRBase;Acc:MI0001186] | ENSGALG00000018255 | gga-miR-15a |  |
| gga-mir-17 | gga-mir-17 [Source:miRBase;Acc:MI0001184] | ENSGALG00000018253 | gga-miR-17-3p, gga-miR-17-5p |  |
| gga-mir-18b | gga-mir-18b [Source:miRBase;Acc:MI0001209] | ENSGALG00000018324 | gga-miR-18b |  |
| gga-mir-194 | gga-mir-194 [Source:miRBase;Acc:MI0001202] | ENSGALG00000018317 | gga-miR-194 |  |
| gga-mir-199-1 | gga-mir-199-1 [Source:miRBase;Acc:MI0001245] | ENSGALG00000018277 | gga-miR-199a |  |
| gga-mir-199-2 | gga-mir-199-2 [Source:miRBase;Acc:MI0001220] | ENSGALG00000018335 | gga-miR-199a |  |
| gga-mir-19a | gga-mir-19a [Source:miRBase;Acc:MI0001182] | ENSGALG00000018251 | gga-miR-19a |  |
| gga-mir-19b | gga-mir-19b [Source:miRBase;Acc:MI0001180] | ENSGALG00000018249 | gga-miR-19b |  |
| gga-mir-1a-1 | gga-mir-1a-1 [Source:miRBase;Acc:MI0001247] | ENSGALG00000018292 | gga-miR-1 |  |
| gga-mir-1a-2 | gga-mir-1a-2 [Source:miRBase;Acc:MI0001196] | ENSGALG00000018288 | gga-miR-1 |  |
| gga-mir-1b | gga-mir-1b [Source:miRBase;Acc:MI0001254] | ENSGALG00000018299 | gga-miR-1b |  |
| gga-mir-200b | gga-mir-200b [Source:miRBase;Acc:MI0001250] | ENSGALG00000018295 | gga-miR-200b |  |
| gga-mir-204-2 | gga-mir-204-2 [Source:miRBase;Acc:MI0001225] | ENSGALG00000018257 | gga-miR-204 |  |
| gga-mir-205b | gga-mir-205b [Source:miRBase;Acc:MI0001238] | ENSGALG00000018270 | gga-miR-205b |  |
| gga-mir-206 | gga-mir-206 [Source:miRBase;Acc:MI0001207] | ENSGALG00000018322 | gga-miR-206, mir-206.Sweetman.2006 |  |
| gga-mir-20b | gga-mir-20b [Source:miRBase;Acc:MI0001517] | ENSGALG00000021725 | gga-miR-20b |  |
| gga-mir-217 | gga-mir-217 [Source:miRBase;Acc:MI0001201] | ENSGALG00000018316 | gga-miR-217 |  |
| gga-mir-221 | gga-mir-221 [Source:miRBase;Acc:MI0001178] | ENSGALG00000018247 | gga-miR-221 |  |
| gga-mir-222 | gga-mir-222 [Source:miRBase;Acc:MI0001177] | ENSGALG00000018246 | gga-miR-222a, gga-miR-222b |  |
| gga-mir-222 | gga-mir-222 [Source:miRBase;Acc:MI0001177] | ENSGALG00000018348 | gga-miR-222a |  |
| gga-mir-23b | gga-mir-23b [Source:miRBase;Acc:MI0001273] | ENSGALG00000018353 | gga-miR-23b |  |
| gga-mir-27b | gga-mir-27b [Source:miRBase;Acc:MI0001274] | ENSGALG00000018354 | gga-miR-27b |  |
| gga-mir-301 | gga-mir-301 [Source:miRBase;Acc:MI0001240] | ENSGALG00000018272 | gga-miR-301 |  |
| gga-mir-32 | gga-mir-32 [Source:miRBase;Acc:MI0001194] | ENSGALG00000018286 | gga-miR-32 |  |
| gga-mir-34a | gga-mir-34a [Source:miRBase;Acc:MI0001251] | ENSGALG00000018296 | gga-miR-34a |  |
| gga-mir-365-1 | gga-mir-365-1 [Source:miRBase;Acc:MI0003703] | ENSGALG00000021731 | gga-miR-365 |  |
| gga-mir-365-2 | gga-mir-365-2 [Source:miRBase;Acc:MI0003704] | ENSGALG00000021737 | gga-miR-365 |  |
| gga-mir-367 | gga-mir-367 [Source:miRBase;Acc:MI0003712] | ENSGALG00000021736 | gga-miR-367 |  |
| gga-mir-375 | gga-mir-375 [Source:miRBase;Acc:MI0003705] | ENSGALG00000021783 | gga-miR-375 |  |
| gga-mir-9-1 | gga-mir-9-1 [Source:miRBase;Acc:MI0003694] | ENSGALG00000021722 | gga-miR-9 |  |
| gga-mir-92 | gga-mir-92 [Source:miRBase;Acc:MI0001179] | ENSGALG00000018248 | gga-miR-92 |  |
| GREM1_CHICK | Gremlin-1 precursor. [Source:Uniprot/SWISSPROT;Acc:O73755] | ENSGALG00000009724 | Drm.Bardot.2004, Drm.Huillard.2004, Gremlin.Nissim.2006 |  |
| GRP78_CHICK | 78 kDa glucose-regulated protein precursor (GRP 78) (Heat shock 70 kDa protein 5) (Immunoglobulin heavy chain-binding protein) (BiP). [Source:Uniprot/SWISSPROT;Acc:Q90593] | ENSGALG00000001000 | G40, P40, R24 |  |
| GSC_CHICK | Homeobox protein goosecoid. [Source:Uniprot/SWISSPROT;Acc:P53545] | ENSGALG00000010974 | E36, Goosecoid.Chapman.2002, Gsc.Abe.2006, GSC.Bachvarova.1998, Gsc.Chapman.2008, GSC.Foley.2000, GSC.Izpisua-Belmonte.1993 |  |
| H3F3B | Histone H3.3. [Source:Uniprot/SWISSPROT;Acc:P84243] | ENSGALG00000020078 | O19 |  |
| HDAC9_CHICK | Histone deacetylase 9. [Source:Uniprot/SWISSPROT;Acc:Q5ZKH6] | ENSGALG00000010854 | pgp1c.pk003.p20 |  |
| HES1_CHICK | Transcription factor HES-1 (Hairy and enhancer of split 1) (C-HAIRY1). [Source:Uniprot/SWISSPROT;Acc:O57337] | ENSGALG00000002055 | Hairy1.Rodrigues.2006, Hairy1.Vasiliauskas.2003, L11, pgp1n.pk008.b9 |  |
| HHEX_CHICK | Homeobox protein PRH (Hematopoietically-expressed homeobox). [Source:Uniprot/SWISSPROT;Acc:Q05502] | ENSGALG00000006778 | Hex, Hex.Bertocchini.2008, Hex.Chapman.2002, Hex.Chapman.2008, Hex.Foley.2000, Hex.Ishii.2007, Hex.Klewer.2006, Hex.Yanai.2005, pat.pk0074.g5 |  |
| HHIP | Hedgehog-interacting protein precursor (HHIP) (HIP). [Source:Uniprot/SWISSPROT;Acc:Q96QV1] | ENSGALG00000009948 | ChEST43a21, HHIP.Agarwala.2005, HHIP.Aglyamova.2007 |  |
| HIF1A_CHICK | Hypoxia-inducible factor 1 alpha (HIF-1 alpha) (HIF1 alpha). [Source:Uniprot/SWISSPROT;Acc:Q9YIB9] | ENSGALG00000011870 | ChEST818o24, DeleteHif1alpha.Ota.2007, HIF1α.Etchevers.2003, Hif1alpha.Ota.2007, HIF-1a.Nanka.2006 |  |
| HMGN1_CHICK | Nonhistone chromosomal protein HMG-14B. [Source:Uniprot/SWISSPROT;Acc:P12274] | ENSGALG00000016067 | HMGN1.53W.A4, HMGN1.53X.A4 |  |
| HMGN3_CHICK | High mobility group nucleosome-binding domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q5ZIR5] | ENSGALG00000015880 | ChEST294a8 |  |
| HNRPK_CHICK | Heterogeneous nuclear ribonucleoprotein K (hnRNP K). [Source:Uniprot/SWISSPROT;Acc:Q5ZIQ3] | ENSGALG00000014366 | gga-miR-7b |  |
| HSPA4 | Heat shock 70 kDa protein 4 (Heat shock 70-related protein APG-2) (HSP70RY). [Source:Uniprot/SWISSPROT;Acc:P34932] | ENSGALG00000007273 | E15 |  |
| HXD9_CHICK | Homeobox protein Hox-D9 (Chox-4.4) (Fragment). [Source:Uniprot/SWISSPROT;Acc:P24340] | ENSGALG00000011640 | ChEST49L2 |  |
| IF2B3_CHICK | Insulin-like growth factor 2 mRNA-binding protein 3 (IGF2 mRNA-binding protein 3) (IGF-II mRNA-binding protein 3) (IMP-3) (VICKZ family member 3). [Source:Uniprot/SWISSPROT;Acc:Q5ZLP8] | ENSGALG00000010961 | A35, D47 |  |
| IF4G2_CHICK | Eukaryotic translation initiation factor 4 gamma 2 (eIF-4-gamma 2) (eIF-4G 2) (eIF4G 2) (p97) (Fragment). [Source:Uniprot/SWISSPROT;Acc:O73777] | ENSGALG00000005587 | D11, J06 |  |
| IHH_CHICK | Indian hedgehog protein precursor (IHH) [Contains: Indian hedgehog protein N-product; Indian hedgehog protein C-product]. [Source:Uniprot/SWISSPROT;Acc:Q98938] | ENSGALG00000011347 | IHH.Aglyamova.2007, Ihh.Bendall.2003 |  |
| IQWD1 | IQ motif and WD repeats 1 isoform b [Source:RefSeq_peptide;Acc:NP_001017977] | ENSGALG00000015435 | pgn1c.pk013.m21 |  |
| ISL1 | Insulin gene enhancer protein ISL-1 (Islet-1). [Source:Uniprot/SWISSPROT;Acc:P61371] | ENSGALG00000014884 | Isl1.Bothe.2006, Islet1.Agarwala.2005, Islet1.Gimeno.2007, Islet1.Hargrave.2000 |  |
| K2CO_CHICK | Keratin, type II cytoskeletal cochleal (Cytokeratin otokeratin). [Source:Uniprot/SWISSPROT;Acc:O93532] | ENSGALG00000010250 | M17, T36 |  |
| KIT_CHICK | Mast/stem cell growth factor receptor precursor (EC 2.7.10.1) (SCFR) (Proto-oncogene tyrosine-protein kinase Kit) (c-kit). [Source:Uniprot/SWISSPROT;Acc:Q08156] | ENSGALG00000013925 | Kit.Reedy.2003 |  |
| LBX1 | | | LBX1.Bothe.2007, Lbx1.Christ.2002, LBX1.Kanamoto.2006, Lbx1.Noden.2006, LBX1.Wilm.2004, qBrn-1.Lan.2006 |  |
| LMBR1_CHICK | Limb region 1 protein homolog. [Source:Uniprot/SWISSPROT;Acc:Q7ZUA6] | ENSGALG00000006400 | Lmbr1.Maas.2004 |  |
| LMX1B_CHICK | LIM/homeobox protein LMX-1.2 (Homeobox protein LMX-1) (LIM/homeobox protein 1) (LMX). [Source:Uniprot/SWISSPROT;Acc:P53413] | ENSGALG00000000936 | LMX1B.Agarwala.2005, LMX1.Holmes.2003, Lmx1.Prin.2004, Lmx1.Zuzarte-Luis.2007 |  |
| MAFF_CHICK | Transcription factor MafF (V-maf musculoaponeurotic fibrosarcoma oncogene homolog F). [Source:Uniprot/SWISSPROT;Acc:Q90595] | ENSGALG00000012277 | ChEST1004n9, MAFF.Lecoin.2004 |  |
| MAFK_CHICK | Transcription factor MafK. [Source:Uniprot/SWISSPROT;Acc:Q90596] | ENSGALG00000004189 | MAFK.Lecoin.2004 |  |
| MGA | CDNA: FLJ22098 fis, clone HEP17040. (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9H6M4] | ENSGALG00000008653 | ChEST695e5 |  |
| MKI67IP | MKI67 FHA domain-interacting nucleolar phosphoprotein (Nucleolar protein interacting with the FHA domain of pKI-67) (hNIFK) (Nucleolar phosphoprotein Nopp34). [Source:Uniprot/SWISSPROT;Acc:Q9BYG3] | ENSGALG00000011650 | ChEST967p13 |  |
| MMP2_CHICK | 72 kDa type IV collagenase precursor (EC 3.4.24.24) (72 kDa gelatinase) (Matrix metalloproteinase-2) (MMP-2) (Gelatinase A). [Source:Uniprot/SWISSPROT;Acc:Q90611] | ENSGALG00000003580 | Mmp2.Duong.2004, Mmp2.Linask.2005 |  |
| MSX2_CHICK | Homeobox protein MSX-2 (CHOX-8) (GHox-8). [Source:Uniprot/SWISSPROT;Acc:P28362] | ENSGALG00000002947 | Msx2.Fernández-Terán.2006, MSX2.Gamer.2001, Msx2.Holleville.2007 |  |
| MTER1_CHICK | mTERF domain-containing protein 1, mitochondrial precursor. [Source:Uniprot/SWISSPROT;Acc:Q5ZJC8] | ENSGALG00000015993 | pgf2n.pk005.a7 |  |
| MYF5_CHICK | Myogenic factor 5 (Myf-5). [Source:Uniprot/SWISSPROT;Acc:Q08856] | ENSGALG00000010937 | Myf5.Ahmed.2006, Myf5.Amthor.2006, Myf5.Bothe.2006, MYF5.Bothe.2007, Myf5.Duprez.2002, MYF5.Kiefer.2001, Myf5.Noden.2006, Myf5.Pujades.2002, Myf5.Reijntjes.2007, MYF5.Wilm.2004, pgm1c.pk001.m21, Zic1.Rhodes.2006 |  |
| MYOD1_CHICK | Myoblast determination protein 1 homolog (MYOD1 homolog). [Source:Uniprot/SWISSPROT;Acc:P16075] | ENSGALG00000006216 | MyoD.Amthor.2002, MyoD.Amthor.2002.mar, MyoD.Amthor.2006, MyoD.Bothe.2007, MyoD.Christ.2002, MyoD.Dastjerdi.2007, MyoD.Duprez.2002, MyoD.Edom-Vovard.2002, MyoD.Gamer.2001, MyoD.Kanamoto.2006, MyoD.Kiefer.2001, MyoD.Noden.2006, MyoD.Reijntjes.2007, MyoD.Rhodes.2006, MyoD.Shukunami.2006, MyoD.Stockdale.2000, MyoD.Stricker.2006, MyoD.Tiecke.2006 |  |
| MYT1 | Myelin transcription factor 1 (MyT1) (MyTI) (Proteolipid protein- binding protein) (PLPB1). [Source:Uniprot/SWISSPROT;Acc:Q01538] | ENSGALG00000005932 | ChEST672b12 |  |
| MYT1L | Myelin transcription factor 1-like protein (MyT1L protein) (MyT1-L). [Source:Uniprot/SWISSPROT;Acc:Q9UL68] | ENSGALG00000016384 | ChEST524c6 |  |
| NCOA5 | Nuclear receptor coactivator 5 (NCoA-5) (Coactivator independent of AF-2) (CIA). [Source:Uniprot/SWISSPROT;Acc:Q9HCD5] | ENSGALG00000007009 | ChEST992l8 |  |
| NDF1_CHICK | Neurogenic differentiation factor 1 (NeuroD1) (NeuroD). [Source:Uniprot/SWISSPROT;Acc:P79765] | ENSGALG00000008908 | NeuroD.Abu-Elmagd.2001, NeuroD.Barembaum.2007, pgp1n.pk006.n18 |  |
| NFYC | Nuclear transcription factor Y subunit gamma (Nuclear transcription factor Y subunit C) (NF-YC) (CAAT-box DNA-binding protein subunit C) (Transactivator HSM-1/2). [Source:Uniprot/SWISSPROT;Acc:Q13952] | ENSGALG00000003189 | gga-miR-30e |  |
| NKX2.5_CHICK | Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E) (cNKX-2.5). [Source:Uniprot/SWISSPROT;Acc:Q90788] | ENSGALG00000002886 | NKX2.5, Nkx2.5.Bothe.2006, NKX2.5.Liberatore.2000, Nkx2.5.Lincoln.2004, Nkx2.5.Theodosiou.2005 |  |
| NM_204202.1 | Gallus gallus claudin 3 (CLDN3), mRNA. Source: RefSeq_dna NM_204202 | ENSGALG00000022557 | Claudin-3.Haworth.2005 |  |
| NMI | N-myc-interactor (Nmi) (N-myc and STAT interactor). [Source:Uniprot/SWISSPROT;Acc:Q13287] | ENSGALG00000012480 | ChEST83j22 |  |
| NP_001001467.1 | TOB protein [Source:RefSeq_peptide;Acc:NP_001001467] | ENSGALG00000007364 | ChEST427l3 |  |
| NP_001001766.1 | particularly interesting new Cys-His protein 1 [Source:RefSeq_peptide;Acc:NP_001001766] | ENSGALG00000016807 | ChEST59d19, PINCH-1.Martinsen.2005 |  |
| NP_001004368.1 | kinase insert domain receptor (a type III receptor tyrosine kinase) [Source:RefSeq_peptide;Acc:NP_001004368] | ENSGALG00000013907 | Flk1.Hashimoto.2003, VEGFR2 |  |
| NP_001005427.1 | mesenchyme homeobox 2 [Source:RefSeq_peptide;Acc:NP_001005427] | ENSGALG00000010794 | Meox2.Reijntjes.2007 |  |
| NP_001006139.1 | MCM2 minichromosome maintenance deficient 2, mitotin [Source:RefSeq_peptide;Acc:NP_001006139] | ENSGALG00000006037 | ChEST966p7 |  |
| NP_001006460.1 | MAX dimerization protein 4 [Source:RefSeq_peptide;Acc:NP_001006460] | ENSGALG00000015688 | pgp1c.pk003.n20 |  |
| NP_001006501.1 | adenosine kinase [Source:RefSeq_peptide;Acc:NP_001006501] | ENSGALG00000005057 | Y43 |  |
| NP_001012543.1 | fibroblast growth factor 7 (keratinocyte growth factor) [Source:RefSeq_peptide;Acc:NP_001012543] | ENSGALG00000005671 | Fgf7.Shin.2005 |  |
| NP_001012550.1 | euchromatic histone methyltransferase 1 [Source:RefSeq_peptide;Acc:NP_001012550] | ENSGALG00000008472 | ChEST359C12 |  |
| NP_001012617.1 | hypothetical protein LOC424580 [Source:RefSeq_peptide;Acc:NP_001012617] | ENSGALG00000010109 | ChEST840c20 |  |
| NP_001025719.1 | protogenin [Source:RefSeq_peptide;Acc:NP_001025719] | ENSGALG00000004361 | Protogenin.Toyoda.2005, PRTG.Vesque.2006 |  |
| NP_001026023.1 | transcription factor MAFB [Source:RefSeq_peptide;Acc:NP_001026023] | ENSGALG00000003670 | MAFB.Lecoin.2004 |  |
| NP_001026026.1 | hepatocyte nuclear factor 4 alpha [Source:RefSeq_peptide;Acc:NP_001026026] | ENSGALG00000004285 | Hnf-4alpha.Yanai.2005 |  |
| NP_001026136.1 | AMP-activated protein kinase gamma2 subunit [Source:RefSeq_peptide;Acc:NP_001026136] | ENSGALG00000006219 | 51D |  |
| NP_001026338.1 | Wolf-Hirschhorn syndrome candidate 2 [Source:RefSeq_peptide;Acc:NP_001026338] | ENSGALG00000015699 | pgm1c.pk002.k13 |  |
| NP_001026495.1 | hypothetical protein LOC425058 [Source:RefSeq_peptide;Acc:NP_001026495] | ENSGALG00000014636 | ChEST496m14 |  |
| NP_001026636.1 | protocadherin alpha 8 [Source:RefSeq_peptide;Acc:NP_001026636] | ENSGALG00000000766 | pgf2n.pk006.a8 |  |
| NP_001032351.1 | wingless-type MMTV integration site family, member 7B [Source:RefSeq_peptide;Acc:NP_001032351] | ENSGALG00000014235 | Wnt7b.Chapman.2008, Wnt7b.Fokina.2006, Wnt7b.von Frowein.2006 |  |
| NP_001033585.1 | eukaryotic translation initiation factor 5B [Source:RefSeq_peptide;Acc:NP_001033585] | ENSGALG00000016764 | E07 |  |
| NP_055646.1 | lupus brain antigen 1 [Source:RefSeq_peptide;Acc:NP_055646] | ENSGALG00000012057 | ChEST924b10 |  |
| NP_989493.1 | aristaless-like homeobox 4 [Source:RefSeq_peptide;Acc:NP_989493] | ENSGALG00000008024 | Alx4.Ahmed.2006, Alx4.Bothe.2006, ALX4.Bothe.2007 |  |
| NP_989500.1 | breast cancer 1, early onset [Source:RefSeq_peptide;Acc:NP_989500] | ENSGALG00000002781 | ChEST423k21 |  |
| NP_989568.1 | transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) [Source:RefSeq_peptide;Acc:NP_989568] | ENSGALG00000015184 | Grg4.Van Hateren.2005 |  |
| NP_989667.1 | wingless-type MMTV integration site family, member 2B [Source:RefSeq_peptide;Acc:NP_989667] | ENSGALG00000001532 | ChEST104k22, Wnt13.Chapman.2008 |  |
| NP_989682.1 | tumor protein p73-like [Source:RefSeq_peptide;Acc:NP_989682] | ENSGALG00000007324 | ChEST852d14 |  |
| NP_989734.1 | BUB1 budding uninhibited by benzimidazoles 1 homolog beta [Source:RefSeq_peptide;Acc:NP_989734] | ENSGALG00000004838 | 52O |  |
| NP_989771.1 | ALC protein [Source:RefSeq_peptide;Acc:NP_989771] | ENSGALG00000000940 | ALC.Holmes.2003 |  |
| NP_989784.1 | T-box 18 [Source:RefSeq_peptide;Acc:NP_989784] | ENSGALG00000015834 | Tbx18.Ishii.2007, Tbx18.Plageman.2005, TBx18.Schlueter.2006, Tbx18.Schulte.2007 |  |
| NP_989832.1 | transmembrane protein 46 [Source:RefSeq_peptide;Acc:NP_989832] | ENSGALG00000017110 | Shisa.Filipe.2006 |  |
| NP_989878.1 | transcription factor 7 (T-cell specific, HMG-box) [Source:RefSeq_peptide;Acc:NP_989878] | ENSGALG00000006480 | Tcf-1.Schmidt.2004 |  |
| NP_989928.1 | eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa [Source:RefSeq_peptide;Acc:NP_989928] | ENSGALG00000002045 | 53E |  |
| NP_989997.1 | C-type lectin domain family 3, member B [Source:RefSeq_peptide;Acc:NP_989997] | ENSGALG00000011883 | ChEST504b3 |  |
| NP_990000.1 | aldehyde dehydrogenase 1 family, member A3 [Source:RefSeq_peptide;Acc:NP_990000] | ENSGALG00000007129 | ChEST859m18 |  |
| NP_990005.1 | fibroblast growth factor 19 [Source:RefSeq_peptide;Acc:NP_990005] | ENSGALG00000007558 | FGF19.Gimeno.2007, FGF19.Kurose.2004, Fgf19.Sanchez-Calderon.2007 |  |
| NP_990096.1 | mesenchyme homeobox 1 [Source:RefSeq_peptide;Acc:NP_990096] | ENSGALG00000001191 | Meox1.Reijntjes.2007, MEOX1.Wilm.2004, Mox-1 |  |
| NP_990124.1 | paired box gene 2 [Source:RefSeq_peptide;Acc:NP_990124] | ENSGALG00000005689 | PAX2.Hurtado.2006, PAX2.Ishii.2007, PAX2.James.2005, Pax2.Maden.2007, Pax2.Noden.2006, Pax2.Sanchez-Calderon.2005, Pax2.Streit.2002, PAX2.Wilm.2004, PAX2.Zhang.2001 |  |
| NP_990138.1 | endothelial PAS domain protein 1 [Source:RefSeq_peptide;Acc:NP_990138] | ENSGALG00000010005 | hif2alpha.Ota.2007, Hif2alpha.Ota.2007, HIF-2a.Nanka.2006, N19 |  |
| NP_990211.1 | activating transcription factor 4 (tax-responsive enhancer element B67) [Source:RefSeq_peptide;Acc:NP_990211] | ENSGALG00000012135 | K37 |  |
| NP_990233.1 | high-mobility group box 1 [Source:RefSeq_peptide;Acc:NP_990233] | ENSGALG00000017082 | ChEST26m2, N01, pgf2c.pk001.e16 |  |
| NP_990304.1 | delta-like 1 [Source:RefSeq_peptide;Acc:NP_990304] | ENSGALG00000011182 | Delta1.Bardot.2004, Delta1.Kiefer.2001, Delta1.Rodrigues.2006, Dll1.Bothe.2006 |  |
| NP_990334.1 | heat shock cognate 70 [Source:RefSeq_peptide;Acc:NP_990334] | ENSGALG00000006512 | A42, T31 |  |
| NP_990344.1 | lymphoid enhancer binding factor-1 [Source:RefSeq_peptide;Acc:NP_990344] | ENSGALG00000010529 | Lef-1.Schmidt.2004, Lef1.Skromne.2001, pgn1c.pk018.g14 |  |
| NP_990396.1 | paired box gene 7 [Source:RefSeq_peptide;Acc:NP_990396] | ENSGALG00000003782 | PAX7.Agarwala.2005, PAX7.Aglyamova.2007, Pax7.Ahmed.2006, Pax7.Amthor.2006, PAX7.Bothe.2007, Pax7.Firnberg.2002 |  |
| NP_990412.1 | catenin (cadherin-associated protein), beta 1, 88kDa [Source:RefSeq_peptide;Acc:NP_990412] | ENSGALG00000011905 | b-catenin.Schmidt.2004, ChEST966d22 |  |
| NP_990479.1 | bone morphogenetic protein 5 [Source:RefSeq_peptide;Acc:NP_990479] | ENSGALG00000016293 | BMP5.Kruithof.2006, Bmp5.Zuzarte.2004 |  |
| NP_990547.1 | Wilms tumor 1 [Source:RefSeq_peptide;Acc:NP_990547] | ENSGALG00000012115 | Wt1.Ishii.2007, Wt1.Schlueter.2006 |  |
| NP_990685.1 | Gnot1 homeodomain protein [Source:RefSeq_peptide;Acc:NP_990685] | ENSGALG00000016090 | C09 |  |
| NRBF2 | Nuclear receptor-binding factor 2 (NRBF-2) (Comodulator of PPAR and RXR). [Source:Uniprot/SWISSPROT;Acc:Q96F24] | ENSGALG00000002959 | ChEST673g15 |  |
| null | null | | gga-miR-183 |  |
| O42407_CHICK | Fibroblast growth factor 10. [Source:Uniprot/SPTREMBL;Acc:O42407] | ENSGALG00000014872 | Fgf10.Karabagli.2002, FGF10.Kruithof.2006, FGF10.Michon.2007, Fgf10.Shin.2005, FGF10.Theodosiou.2005 |  |
| OSR1 | Protein odd-skipped-related 1. [Source:Uniprot/SWISSPROT;Acc:Q8TAX0] | ENSGALG00000016473 | Odd-1.James.2005, Osr1.Stricker.2006, OSR1.Wilm.2004 |  |
| OSR2 | Protein odd-skipped-related 2. [Source:Uniprot/SWISSPROT;Acc:Q8N2R0] | ENSGALG00000016016 | Osr2.Stricker.2006 |  |
| OTX2 | orthodenticle homolog 2 [Source:RefSeq_peptide;Acc:NP_989851] | ENSGALG00000020352 | Otx2, Otx 2.Abe.2006, OTX2.Agarwala.2005, Otx2..Badde.2005, Otx2.Chapman.2002, Otx2.Chapman.2008, OTX2.Foley.2000, OTX2.Ohuchi.2007, OTX2.Plouhinec.2005, Otx2.Sanchez-Calderon, Otx2.von Frowein.2006, Otx2.Zhang.2001 |  |
| PAX3 | Paired box protein Pax-3 (HUP2). [Source:Uniprot/SWISSPROT;Acc:P23760] | ENSGALG00000005246 | Pax3.Ahmed.2006, Pax3.Amthor.2002.mar, Pax3.Amthor.2006, Pax3.Bothe.2006, PAX3.Bothe.2007, Pax3.Cheng.2004, Pax3.Christ.2002, Pax3.Duprez.2002, Pax3.Firnberg.2002, PAX3.Gamer.2001, Pax3.Jensen.2005, PAX3.Lin.2007, Pax3.Reijntjes.2007, Pax3.Stricker.2006 |  |
| PAX6_CHICK | Paired box protein Pax-6 (Fragment). [Source:Uniprot/SWISSPROT;Acc:P47237] | ENSGALG00000012123 | PAX6.Agarwala.2005, PAX6.Bell.2001, Pax6.Bhattacharyya.2004, PAX6.Garcia-Calero.2006, PAX6.Gimeno.2007, Pax6.Jensen.2005, Pax6.Maden.2007, PAX6.Ohuchi.2007, PAX6.Vieira.2005, PAX6.Zhang.2001 |  |
| PDCD11 | RRP5 protein homolog (Programmed cell death protein 11). [Source:Uniprot/SWISSPROT;Acc:Q14690] | ENSGALG00000008265 | ChEST1018p6 |  |
| PDLI4_CHICK | PDZ and LIM domain protein 4 (LIM protein RIL) (Reversion-induced LIM protein). [Source:Uniprot/SWISSPROT;Acc:Q9PW72] | ENSGALG00000006683 | pgn1c.pk018.f9 |  |
| PGAM1_CHICK | Phosphoglycerate mutase 1 (EC 5.4.2.1) (EC 5.4.2.4) (EC 3.1.3.13) (BPG-dependent PGAM 1). [Source:Uniprot/SWISSPROT;Acc:Q5ZLN1] | ENSGALG00000007606 | D52 |  |
| PHAR1_CHICK | Phosphatase and actin regulator 1. [Source:Uniprot/SWISSPROT;Acc:Q801X6] | ENSGALG00000012732 | DDSG1.Shin.2003 |  |
| PPP1R13B | Apoptosis-stimulating of p53 protein 1 (Protein phosphatase 1 regulatory subunit 13B). [Source:Uniprot/SWISSPROT;Acc:Q96KQ4] | ENSGALG00000011548 | ChEST527g14, Soares1812E01 |  |
| PRDX6_CHICK | Peroxiredoxin-6 (EC 1.11.1.15). [Source:Uniprot/SWISSPROT;Acc:Q5ZJF4] | ENSGALG00000003053 | C01 |  |
| PROX1_CHICK | Homeobox prospero-like protein PROX1 (PROX 1). [Source:Uniprot/SWISSPROT;Acc:Q91018] | ENSGALG00000009791 | ChEST49e24, Prox1.Kurose.2004, Prox1.Wilting.2006, Prox1.Yanai.2005 |  |
| PTC1_CHICK | Protein patched homolog 1 (PTC1) (PTC). [Source:Uniprot/SWISSPROT;Acc:Q90693] | ENSGALG00000012620 | PTC1.Agarwala.2005, PTC1.Aglyamova.2007, PTC1.Pearse.2001, PTC1.Zhang.2001, PTC.McKinnell.2004 |  |
| PTCH2 | Protein patched homolog 2 (PTC2). Source: Uniprot/SWISSPROT Q9Y6C5 | ENSGALG00000022005 | PTC2.Aglyamova.2007, PTC2.Pearse.2001 |  |
| Q5ZIA9_CHICK | Hypothetical protein. [Source:Uniprot/SPTREMBL;Acc:Q5ZIA9] | ENSGALG00000000823 | ChEST172n7 |  |
| Q5ZIC0_CHICK | Hypothetical protein. [Source:Uniprot/SPTREMBL;Acc:Q5ZIC0] | ENSGALG00000011351 | F31 |  |
| Q5ZK27_CHICK | Hypothetical protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5ZK27] | ENSGALG00000010077 | ChEST46k12 |  |
| Q8UVD4_CHICK | Homeodomain-interacting protein kinase 2 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8UVD4] | ENSGALG00000012792 | ChEST612c17 |  |
| Q90692_CHICK | SIM1 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q90692] | ENSGALG00000015466 | Sim1.Agarwala.2005, Sim1.Ahmed.2006, Sim1.Bothe.2007, Sim1.Cheng.2004 |  |
| Q90868_CHICK | HNF-3b protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q90868] | ENSGALG00000018733 | FOXA2.Agarwala.2005, Hnf3β.Abe.2006, HNF-3b, HNF3b.Chapman.2002, Hnf3b.Chapman.2008, HNF-3BETA.Foley.2000, Hnf-3beta.Yanai.2005, HNF3-B.Levin.1995 |  |
| Q90XG3_CHICK | Slit-2 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q90XG3] | ENSGALG00000014419 | Slit2.Holmes.2001, Slit2.Wilson.2006 |  |
| Q90Z43_CHICK | Slit3 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q90Z43] | ENSGALG00000001916 | Slit3.Holmes.2001 |  |
| Q91954_CHICK | Gallus gallus (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q91954] | ENSGALG00000000781 | ChEST316A1 |  |
| Q98SH5_CHICK | Sterol regulatory element binding protein 2 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q98SH5] | ENSGALG00000011916 | ChEST722e14, gga-miR-33 |  |
| Q9DEC9_CHICK | Notch2 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q98UI4] | ENSGALG00000002922 | ChEST832m1, Notch2.Bardot.2004 |  |
| Q9DF31_CHICK | GLI3 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9IA31] | ENSGALG00000012329 | GLI3.Agarwala.2005, GLI3.Aglyamova.2007, GLI3.Granata.2004, Gli3.von Frowein.2006 |  |
| Q9I8T6_CHICK | Bone morphogenetic protein 7 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9I8T6] | ENSGALG00000007668 | Bmp7.Ashique.2002, Bmp7.Chapman.2002, Bmp7.Chapman.2008, Bmp7.Holleville.2007, Bmp7.Huillard.2004, Bmp7.Jensen.2005, BMP7.Joubin.1999, BMP7.Kruithof.2006, Bmp7.Nissim.2006, BMP7.Ohta.2007, BMP7.Streit.1998, Bmp7.von Frowein.2006 |  |
| Q9I9K4_CHICK | Nidogen 1 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9I9K4] | ENSGALG00000010982 | ChEST660e3 |  |
| Q9W737_CHICK | NOTCH-1 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9W737] | ENSGALG00000002375 | Notch1.Barembaum.2007, Notch1.Hayes.2007, Notch1.Politis.2007, Notch1.Rodrigues.2006, pgn1c.pk011.j11 |  |
| RAPGEF1 | Rap guanine nucleotide exchange factor 1 (Guanine nucleotide-releasing factor 2) (C3G protein) (CRK SH3-binding GNRP). [Source:Uniprot/SWISSPROT;Acc:Q13905] | ENSGALG00000003712 | ChEST578b22 |  |
| SAP_CHICK | Proactivator polypeptide precursor [Contains: Saposin-A; Saposin-B; Saposin-C; Saposin-D]. [Source:Uniprot/SWISSPROT;Acc:O13035] | ENSGALG00000004769 | C05, T22 |  |
| SHH_CHICK | Sonic hedgehog protein precursor (SHH) [Contains: Sonic hedgehog protein N-product; Sonic hedgehog protein C-product]. [Source:Uniprot/SWISSPROT;Acc:Q91035] | ENSGALG00000006379 | Shh.Agarwala.2005, Shh.Aglyamova.2007, Shh.Bardot.2004, Shh.Christ.2002, Shh.Garcia-Calero.2006, Shh.Gimeno.2007, Shh.Ha.2003, Shh.Hurtado.2006, Shh.Levin.1995, Shh.Lobjois.2004, Shh.Maas.2004, Shh.Maden.2007, Shh.McKinnell.2004, Shh.Pearse.2001, Shh.Prin.2004, Shh.Shin.2006, Shh.Tomonari.2007, Shh.Vasiliauskas.1999, Shh.Vieira.2005, Shh.Zhang.2001, Sonic_Hedgehog |  |
| SLTM | modulator of estrogen induced transcription isoform a [Source:RefSeq_peptide;Acc:NP_079031] | ENSGALG00000004192 | pgp1n.pk001.d20 |  |
| SMARCD2 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 (60 kDa BRG-1/Brm-associated factor subunit B) (BRG1-associated factor 60B). [Source:Uniprot/SWISSPROT;Acc:Q92925] | ENSGALG00000000363 | pgn1c.pk010.h16, SMARCD2.23b3 |  |
| SNAI2 | snail homolog 2 | ENSGALG00000015241 | pgf2n.pk005.p6, Slug, Slug.Kamimura.2004, Slug.Ladher.2000, Slug.Marin2.2004, Slug.Ohta.2007, Slug.Schmidt.2007, Snail2.Graham.2007, Snail.Marin.2004 |  |
| SOX9_CHICK | Transcription factor SOX-9. [Source:Uniprot/SWISSPROT;Acc:P48434] | ENSGALG00000004386 | Sox9.Baranski.2000, Sox9.Bendall.2003, Sox9.McKeown.2005, Sox9.Theodosiou.2005, Sox9.Tiecke.2006, sox9.zhao.2007 |  |
| SPY2_CHICK | Sprouty homolog 2 (Spry-2). [Source:Uniprot/SWISSPROT;Acc:Q9PTL2] | ENSGALG00000016906 | Sprouty2.Chambers.2000, Spry2.Goodnough.2007 |  |
| SSBP3_CHICK | Single-stranded DNA-binding protein 3 (Sequence-specific single- stranded-DNA-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q98948] | ENSGALG00000010774 | ChEST98c8 |  |
| STMN2_CHICK | Stathmin-2 (SCG10 protein) (Superior cervical ganglion-10 protein). [Source:Uniprot/SWISSPROT;Acc:Q90987] | ENSGALG00000015736 | SCG10.Politis.2007, SCG10.Shin.2003 |  |
| TBX3_CHICK | T-box transcription factor TBX3 (T-box protein 3) (Fragment). [Source:Uniprot/SWISSPROT;Acc:O73718] | ENSGALG00000008250 | Tbx3.Tumpel.2002, Tbx3.Yamada.2000 |  |
| TBX5_CHICK | T-box transcription factor TBX5 (T-box protein 5). [Source:Uniprot/SWISSPROT;Acc:Q9PWE8] | ENSGALG00000008253 | ChEST59k10, Tbx5.Canto-Soler.2006, Tbx5.Hurtado.2006, Tbx5.Liberatore.2000, Tbx5.Lincoln.2004, Tbx5.Maden.2007, Tbx5.Peters.2002, Tbx5.Plageman.2005, Tbx5.Yamada.2000 |  |
| TCF21 | Transcription factor 21 (Podocyte-expressed 1) (Pod-1) (Epicardin) (Capsulin). [Source:Uniprot/SWISSPROT;Acc:O43680] | ENSGALG00000013982 | Capsulin.Dastjerdi.2007, Capsulin.Ishii.2007, Capsulin.vonScheven.2006, ChEST265h24 |  |
| TLE2 | Transducin-like enhancer protein 2 (ESG2). Source: Uniprot/SWISSPROT Q04725 | ENSGALG00000008120 | Grg2.Van Hateren.2005, Grg3.Van Hateren.2005, pgn1c.pk019.j5 |  |
| TRFE_CHICK | Ovotransferrin precursor (Conalbumin) (Allergen Gal d 3) (Gal d III) (Serum transferrin). [Source:Uniprot/SWISSPROT;Acc:P02789] | ENSGALG00000006453 | Ovotransferrin.Yanai.2005 |  |
| TSHZ3 | Teashirt homolog 3 (Zinc finger protein 537). [Source:Uniprot/SWISSPROT;Acc:Q63HK5] | ENSGALG00000004528 | ChEST263o14, TSHZ3.Manfroid.2006a |  |
| TTHY_CHICK | Transthyretin precursor (Prealbumin) (TBPA). [Source:Uniprot/SWISSPROT;Acc:P27731] | ENSGALG00000015143 | Transthyretin.Yanai.2005, Ttr.von Frowein.2006 |  |
| UHRF1 | E3 ubiquitin-protein ligase UHRF1 (EC 6.3.2.-) (Ubiquitin-like PHD and RING finger domain-containing protein 1) (Ubiquitin-like-containing PHD and RING finger domains protein 1) (Inverted CCAAT box-binding protein of 90 kDa) (Transcription factor ICBP90) [Source:Uniprot/SWISSPROT;Acc:Q96T88] | ENSGALG00000004132 | ChEST85k11 |  |
| VAX1_CHICK | Ventral anterior homeobox 1. [Source:Uniprot/SWISSPROT;Acc:Q9PVN2] | ENSGALG00000009261 | Vax.Canto-Soler.2006, Vax.Peters.2002, Vax.Zhang.2001 |  |
| VEGFA_CHICK | Vascular endothelial growth factor A precursor (VEGF-A) (Vascular permeability factor) (VPF). [Source:Uniprot/SWISSPROT;Acc:P67964] | ENSGALG00000010290 | VEGF.Nanka.2006 |  |
| WNT7A | wingless-type MMTV integration site family, member 7A [Source:RefSeq_peptide;Acc:NP_989623] | ENSGALG00000005123 | Wnt7a.Baranski.2000, Wnt7a.Chapman.2008, Wnt7a.Chesnutt.2004, Wnt7a.Fokina.2006, WNT7A.Holmes.2003, Wnt7a.Michon.2007, Wnt7a.Prin.2004 |  |
| XR_026852.1 | PREDICTED: Gallus gallus similar to Hoxb-7 (LOC425962), mRNA. [Source:RefSeq_dna;Acc:XR_026852] | ENSGALG00000013215 | ChEST611c8 |  |
| XR_027135.1 | PREDICTED: Gallus gallus similar to retinoid X receptor-alpha (LOC417143), mRNA. [Source:RefSeq_dna;Acc:XR_027135] | ENSGALG00000002626 | pgp1n.pk002.k3, RXRa.Cui.2003 |  |
| XR_027180.1 | PREDICTED: Gallus gallus similar to Transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) (LOC427450), mRNA. [Source:RefSeq_dna;Acc:XR_027180] | ENSGALG00000012575 | Grg1.Van Hateren.2005 |  |
| ZC3H6 | Zinc finger CCCH domain-containing protein 6. [Source:Uniprot/SWISSPROT;Acc:P61129] | ENSGALG00000008269 | ChEST647i16 |  |
| ZDHHC3 | Palmitoyltransferase ZDHHC3 (EC 2.3.1.-) (Zinc finger DHHC domain- containing protein 3) (DHHC-3) (Zinc finger protein 373) (DHHC1 protein). [Source:Uniprot/SWISSPROT;Acc:Q9NYG2] | ENSGALG00000011887 | ChEST811g22 |  |
| | ETS domain-containing transcription factor ERF (Ets2 repressor factor). [Source:Uniprot/SWISSPROT;Acc:P50548] | ENSGALG00000000669 | ChEST762b3 |  |
| | | ENSGALG00000020627 | Shox.Tiecke.2006 |  |
| | Cyp26C1 | ENSGALG00000023751 | Cyp26C1.Bothe.2006, Cyp26C1.Reijntjes.2004 |  |
| | | ENSGALG00000021887 | ChEST463b18 |  |
| | Afadin (Protein AF-6). [Source:Uniprot/SWISSPROT;Acc:P55196] | ENSGALG00000011329 | ChEST127p23 |  |
| | similar to cytokeratin 8 | ENSGALG00000012169 | CK8.Yanai.2005 |  |
| | | ENSGALG00000008751 | SCGPR1.Odani.2007 |  |
| | KLF2 | ENSGALG00000003939 | pgp1n.pk010.g3 |  |